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2.2k
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Error creating pool for permutation test (PeakPermTest from ChipPeakAnno)
permutation ChIP-Seq ChipPeakAnno
updated 2.4 years ago by ▴ 10 • written 6.4 years ago by ▴ 90
2
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2
replies
2.6k
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Primer design to do qPCR on repetitive elements
qPCR repetitive elements repeats
updated 4.1 years ago by 20 • written 6.9 years ago by ▴ 90
0
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0
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16k
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Comment: C: duplicate 'row.names' are not allowed
4.1 years ago by Gema Sanz ▴ 90
0
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0
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7.7k
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Comment: C: Load Bigwig To Ucsc Genome Browser Without Http, Ftp
updated 4.9 years ago by 44k • written 10.7 years ago by ▴ 90
1
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1
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1.0k
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Read TCGA BAM files into TEtranscripts tool (python) without downloading them?
TCGA bam linux RNA-seq
5.6 years ago by Gema Sanz ▴ 90
19
votes
21
replies
6.6k
views
How to calculate moderated z-score (MODZ)
z-score modz
updated 5.6 years ago by • 0 • written 6.8 years ago by ▴ 90
1
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0
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6.6k
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Comment: C: How to calculate moderated z-score (MODZ)
6.8 years ago by Gema Sanz ▴ 90
0
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1
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6.6k
views
Comment: C: How to calculate moderated z-score (MODZ)
6.8 years ago by Gema Sanz ▴ 90
1
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0
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3.1k
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Answer: A: How can I analyze microarray and RNA-Seq data from TCGA?
6.8 years ago by Gema Sanz ▴ 90
0
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1
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6.6k
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Comment: C: How to calculate moderated z-score (MODZ)
6.8 years ago by Gema Sanz ▴ 90
0
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0
replies
6.6k
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Comment: C: How to calculate moderated z-score (MODZ)
6.8 years ago by Gema Sanz ▴ 90
0
votes
0
replies
6.6k
views
Comment: C: How to calculate moderated z-score (MODZ)
6.8 years ago by Gema Sanz ▴ 90
0
votes
1
reply
6.6k
views
Comment: C: How to calculate moderated z-score (MODZ)
6.8 years ago by Gema Sanz ▴ 90
0
votes
1
reply
2.6k
views
Comment: C: correlation between genes
6.8 years ago by Gema Sanz ▴ 90
0
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1
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2.6k
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Comment: C: correlation between genes
6.8 years ago by Gema Sanz ▴ 90
0
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0
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2.6k
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Comment: C: Primer design to do qPCR on repetitive elements
6.9 years ago by Gema Sanz ▴ 90
0
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0
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42k
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Comment: C: Transform a GTF file into a data frame in R
7.0 years ago by Gema Sanz ▴ 90
0
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0
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1.7k
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Comment: C: How to introduce a spacer in a transcription factor PWM matrix?
7.2 years ago by Gema Sanz ▴ 90
0
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1
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1.7k
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Comment: C: How to introduce a spacer in a transcription factor PWM matrix?
7.2 years ago by Gema Sanz ▴ 90
0
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1
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1.7k
views
Comment: C: How to introduce a spacer in a transcription factor PWM matrix?
7.2 years ago by Gema Sanz ▴ 90
0
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5
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1.7k
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How to introduce a spacer in a transcription factor PWM matrix?
sequence
updated 7.2 years ago by 10k • written 7.2 years ago by ▴ 90
0
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0
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4.2k
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Comment: C: Salmon/Sailfish for repeat element quantification?
7.2 years ago by Gema Sanz ▴ 90
0
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1
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4.2k
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Comment: C: Salmon/Sailfish for repeat element quantification?
7.2 years ago by Gema Sanz ▴ 90
0
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3
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2.7k
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featureCounts reports zero counts when using GTF Repeatmasker track from UCSC and Bowtie2 SAM mapped RNA-seq reads
RNA-Seq software error
7.2 years ago by Gema Sanz ▴ 90
0
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0
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2.7k
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Answer: A: featureCounts reports zero counts when using GTF Repeatmasker track from UCSC an
7.2 years ago by Gema Sanz ▴ 90
0
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0
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2.7k
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Comment: C: featureCounts reports zero counts when using GTF Repeatmasker track from UCSC an
7.2 years ago by Gema Sanz ▴ 90
0
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0
replies
23k
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Comment: C: Tools For Visualizing Overlap Between Go Terms
7.5 years ago by Gema Sanz ▴ 90
0
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1
reply
6.4k
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Comment: C: Hypergeometric test for overlapped genes
updated 7.5 years ago by 147k • written 7.5 years ago by ▴ 90
0
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0
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6.4k
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Comment: A: Hypergeometric test for overlapped genes
7.5 years ago by Gema Sanz ▴ 90
6
votes
7
replies
4.9k
views
WGBS data analysis in Galaxy?
Bi-seq WGBS Alignment
updated 2.4 years ago by 44k • written 10.0 years ago by ▴ 90
0
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1
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4.9k
views
Comment: A: WGBS data analysis in Galaxy?
10.0 years ago by Gema Sanz ▴ 90
1
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0
replies
27k
views
Comment: C: What Are These Rp11 'Genes' In The Genome?
11.1 years ago by Gema Sanz ▴ 90
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