Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
4
votes
7
replies
2.4k
views
Is it OK to use --split-files option in fastq-dump when processing SE data?
fastq-dump
updated 7.5 years ago by 104k • written 7.5 years ago by ★ 1.4k
0
votes
1
reply
4.4k
views
Comment: C: How to download raw data in batch from NCBI based on Series Accession number or
7.5 years ago by biolab ★ 1.4k
0
votes
0
replies
4.4k
views
Comment: C: How to download raw data in batch from NCBI based on Series Accession number or
7.5 years ago by biolab ★ 1.4k
0
votes
0
replies
1.9k
views
Comment: C: Removing shorter reads in PE mapping
7.6 years ago by biolab ★ 1.4k
0
votes
0
replies
1.9k
views
Comment: C: Removing shorter reads in PE mapping
7.6 years ago by biolab ★ 1.4k
0
votes
1
reply
1.9k
views
Comment: C: Removing shorter reads in PE mapping
7.6 years ago by biolab ★ 1.4k
0
votes
1
reply
1.9k
views
Comment: C: Removing shorter reads in PE mapping
7.6 years ago by biolab ★ 1.4k
3
votes
8
replies
1.9k
views
Removing shorter reads in PE mapping
mapping
updated 7.6 years ago by 35k • written 7.6 years ago by ★ 1.4k
0
votes
0
replies
1.2k
views
Comment: C: Which tool was used to generate this mapping file?
7.6 years ago by biolab ★ 1.4k
0
votes
1
reply
1.2k
views
Comment: C: Which tool was used to generate this type of mapping file?
7.6 years ago by biolab ★ 1.4k
0
votes
5
replies
1.2k
views
Which tool was used to generate this mapping file?
mapping
7.6 years ago by biolab ★ 1.4k
0
votes
1
reply
2.6k
views
Comment: C: How to embed genome browser in a web site?
7.6 years ago by biolab ★ 1.4k
4
votes
7
replies
2.6k
views
How to embed genome browser in a web site?
genome browser
updated 7.6 years ago by ★ 4.0k • written 7.6 years ago by ★ 1.4k
0
votes
0
replies
2.6k
views
Comment: C: How to embed genome browser in a web site?
7.6 years ago by biolab ★ 1.4k
2
votes
2
replies
3.0k
views
Output unmapped reads to a file when using tophat2
tophat2
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 1.4k
6
votes
3
replies
4.0k
views
Tophat --max-multihits option
tophat
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 1.4k
0
votes
0
replies
9.1k
views
Comment: C: Which model to choose in edgeR analysis?
8.4 years ago by biolab ★ 1.4k
0
votes
1
reply
9.1k
views
Comment: C: Which model to choose in edgeR analysis?
8.4 years ago by biolab ★ 1.4k
0
votes
1
reply
9.1k
views
Comment: C: Which model to choose in edgeR analysis?
8.4 years ago by biolab ★ 1.4k
4
votes
7
replies
9.1k
views
Which model to choose in edgeR analysis?
edgeR
updated 8.4 years ago by 8.3k • written 8.4 years ago by ★ 1.4k
19
votes
15
replies
27k
views
6 follow
tophat-cufflinks command pipeline
cufflinks tophat
updated 22 months ago by 44k • written 9.9 years ago by ★ 1.4k
8
votes
3
replies
5.5k
views
Arabidopsis GFF files
Arabidopsis gff
updated 2.8 years ago by 44k • written 10.0 years ago by ★ 1.4k
0
votes
0
replies
1.9k
views
Comment: C: How to identify the loci producing differential small RNAs between two samples?
8.5 years ago by biolab ★ 1.4k
4
votes
3
replies
1.9k
views
How to identify the loci producing differential small RNAs between two samples?
small RNAs
8.5 years ago by biolab ★ 1.4k
0
votes
0
replies
2.5k
views
Comment: C: FASTQ file error
8.6 years ago by biolab ★ 1.4k
1
vote
2
replies
2.5k
views
FASTQ file error
fastq
8.6 years ago by biolab ★ 1.4k
0
votes
0
replies
1.8k
views
Comment: C: bowtie1 parameter -k
8.7 years ago by biolab ★ 1.4k
1
vote
2
replies
1.8k
views
bowtie1 parameter -k
bowtie1
updated 8.7 years ago by ★ 2.1k • written 8.7 years ago by ★ 1.4k
0
votes
0
replies
8.7k
views
Comment: C: How to Use Biostars, Part II: Post types, Deleting, (Un)Subscribing, Linking and
8.7 years ago by biolab ★ 1.4k
0
votes
0
replies
3.0k
views
Comment: C: GFOLD value cutoff
8.7 years ago by biolab ★ 1.4k
0
votes
1
reply
3.0k
views
Comment: C: GFOLD value cutoff
8.7 years ago by biolab ★ 1.4k
2
votes
4
replies
4.8k
views
tophat install problem
tophat
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 1.4k
0
votes
0
replies
2.2k
views
Comment: C: Method to identify novel transcript based on strand-specific RNAseq
8.9 years ago by biolab ★ 1.4k
1
vote
2
replies
2.2k
views
Method to identify novel transcript based on strand-specific RNAseq
cufflinks
updated 2.3 years ago by 44k • written 8.9 years ago by ★ 1.4k
7
votes
5
replies
4.0k
views
question about unstranded RNA-seq
unstranded RNA-seq
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 1.4k
5
votes
9
replies
4.9k
views
IGV view of bam file
igv
updated 2.3 years ago by 44k • written 9.0 years ago by ★ 1.4k
0
votes
0
replies
4.9k
views
Comment: C: IGV view of bam file
9.0 years ago by biolab ★ 1.4k
0
votes
1
reply
3.5k
views
Comment: C: Is HTseq result based on uniquely mapped reads?
9.0 years ago by biolab ★ 1.4k
2
votes
3
replies
3.5k
views
Is HTseq result based on uniquely mapped reads?
htseq
updated 2.3 years ago by 44k • written 9.0 years ago by ★ 1.4k
1
vote
0
replies
6.2k
views
Comment: C: How to get fasta sequences based on bt2 index?
9.0 years ago by biolab ★ 1.4k
7
votes
4
replies
6.2k
views
How to get fasta sequences based on bt2 index?
index bowtie2
updated 2.3 years ago by 44k • written 9.0 years ago by ★ 1.4k
0
votes
0
replies
2.4k
views
Comment: C: tophat-cuffdiff or tophat-cufflinks-cuffmerge-cuffdiff?
9.0 years ago by biolab ★ 1.4k
1
vote
2
replies
2.4k
views
tophat-cuffdiff or tophat-cufflinks-cuffmerge-cuffdiff?
cuffdiff cufflinks
updated 2.4 years ago by 44k • written 9.0 years ago by ★ 1.4k
4
votes
6
replies
8.0k
views
What tools to perform alignment without adding gaps in?
alignment
updated 2.8 years ago by 44k • written 10.1 years ago by ★ 1.4k
0
votes
0
replies
1.3k
views
Problem with using BamView
BamView
updated 2.3 years ago by 44k • written 9.0 years ago by ★ 1.4k
8
votes
4
replies
7.4k
views
Where to find BLAST+ default parameters?
blast
updated 4 months ago by 11k • written 9.0 years ago by ★ 1.4k
1
vote
1
reply
15k
views
Comment: C: Script To Calculate Dinucleotide Frequency For Many Sequences
9.0 years ago by biolab ★ 1.4k
20
votes
17
replies
8.8k
views
8 follow
Merge Files (Adding File Names To Sequence Names)
perl awk
updated 9.1 years ago by 20 • written 10.9 years ago by ★ 1.4k
7
votes
9
replies
5.2k
views
Why some lines of BAM file do not contain NH tag
bam NH-tag
updated 2.3 years ago by 44k • written 9.1 years ago by ★ 1.4k
2
votes
7
replies
4.3k
views
Bowtie Assembly Parameters
assembly
updated 9.1 years ago by 20 • written 11.0 years ago by ★ 1.4k
426 results • Page 2 of 9
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6