Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
260
views
Best codeml model for estimating omega, M0 ?
codeml ete3 evol
11 months ago by Adrian Pelin ★ 2.6k
0
votes
1
reply
544
views
PAML/codeml Poxvirus dN/dS
dNdS codeml selection
updated 17 months ago by ▴ 550 • written 17 months ago by ★ 2.6k
0
votes
0
replies
796
views
Comment: Comment: Estimating mRNA 5' degradation from RNA-seq illumina strand-specific reads
2.3 years ago by Adrian Pelin ★ 2.6k
2
votes
2
replies
796
views
Estimating mRNA 5' degradation from RNA-seq illumina strand-specific reads
mRNA decay RNA-seq
2.3 years ago by Adrian Pelin ★ 2.6k
3
votes
1
reply
590
views
Differential pathways between 2 gene sets
enrichment GO KEGG
updated 2.4 years ago by 13k • written 2.4 years ago by ★ 2.6k
2
votes
4
replies
3.0k
views
List of human protein coding genes with given name (known function?)
RNA-Seq Annotation Human
updated 3.5 years ago by ★ 9.6k • written 5.5 years ago by ★ 2.6k
0
votes
1
reply
1.1k
views
Comment: C: Need opinion on correct bioinfo analysis; NGS on virus competition exp
4.9 years ago by Adrian Pelin ★ 2.6k
0
votes
0
replies
1.1k
views
Comment: C: Need opinion on correct bioinfo analysis; NGS on virus competition exp
4.9 years ago by Adrian Pelin ★ 2.6k
0
votes
1
reply
1.1k
views
Comment: C: Need opinion on correct bioinfo analysis; NGS on virus competition exp
4.9 years ago by Adrian Pelin ★ 2.6k
0
votes
6
replies
1.1k
views
Need opinion on correct bioinfo analysis; NGS on virus competition exp
Abundace RNA-Seq
4.9 years ago by Adrian Pelin ★ 2.6k
0
votes
6
replies
4.9k
views
Blast2Go Local Www-Blast Not Working
updated 4.9 years ago by 20 • written 11.3 years ago by ★ 2.6k
0
votes
1
reply
2.2k
views
Comment: C: Test for recombination in a clonal tetraploid?
updated 5.1 years ago by 44k • written 10.7 years ago by ★ 2.6k
0
votes
0
replies
2.7k
views
Comment: C: Linkage Disequlibirum (R^2) = recombination?
updated 5.1 years ago by 44k • written 10.7 years ago by ★ 2.6k
0
votes
1
reply
27k
views
Comment: C: Calculate Per Exon/Per Gene Coverage
updated 5.1 years ago by 44k • written 10.7 years ago by ★ 2.6k
0
votes
1
reply
27k
views
Comment: C: Calculate Per Exon/Per Gene Coverage
updated 5.1 years ago by 44k • written 10.7 years ago by ★ 2.6k
1
vote
2
replies
4.8k
views
Answer: A: How to assemble the bacterial genome; spades
updated 5.1 years ago by 44k • written 9.1 years ago by ★ 2.6k
0
votes
0
replies
4.9k
views
Comment: C: Merging Bayesian probability values with bootstraps from ML
updated 5.1 years ago by 44k • written 10.8 years ago by ★ 2.6k
0
votes
1
reply
24k
views
Comment: C: Efficiently process (view, analize, clip ends, convert, demultiplex, dereplicate
updated 5.2 years ago by 44k • written 10.4 years ago by ★ 2.6k
0
votes
1
reply
8.7k
views
Comment: C: bedtools: extracting no coverage regions
updated 5.2 years ago by 44k • written 10.8 years ago by ★ 2.6k
0
votes
1
reply
7.5k
views
Comment: C: Error in SNP calling, samtools
updated 5.2 years ago by 44k • written 10.6 years ago by ★ 2.6k
1
vote
1
reply
3.5k
views
Answer: A: finding reads from fastq files corresponds to particular transcript from fasta f
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 2.6k
1
vote
1
reply
1.8k
views
Answer: A: Where to find the reference genome from the Human Genome Project?
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 2.6k
2
votes
1
reply
7.3k
views
Answer: A: How to draw a coverage vs GC content plot for assembled transcriptome?
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 2.6k
1
vote
1
reply
11k
views
Comment: Comment: DNA composition - all k-mers and their frequency in some sequencing data
updated 2.5 years ago by 44k • written 9.3 years ago by ★ 2.6k
1
vote
1
reply
11k
views
Comment: C: DNA composition - all k-mers and their frequency in some sequencing data
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 2.6k
1
vote
1
reply
11k
views
Comment: C: DNA composition - all k-mers and their frequency in some sequencing data
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 2.6k
0
votes
0
replies
17k
views
Comment: C: How to remove contamination from the transcriptome assembly
updated 5.2 years ago by 44k • written 9.2 years ago by ★ 2.6k
0
votes
1
reply
17k
views
Comment: C: How to remove contamination from the transcriptome assembly
updated 5.2 years ago by 44k • written 9.2 years ago by ★ 2.6k
1
vote
0
replies
5.7k
views
Answer: A: adding suffix /1 & /2 to PE data - abyss input data
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 2.6k
0
votes
0
replies
5.7k
views
Comment: C: adding suffix /1 & /2 to PE data - abyss input data
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 2.6k
0
votes
0
replies
3.3k
views
Comment: C: VelvetOptimizer:Error in running the program
updated 5.3 years ago by 44k • written 9.3 years ago by ★ 2.6k
2
votes
3
replies
2.0k
views
Advice on DE analysis of mouse and human merged RNA-seq data
RNA-Seq DEseq Human Mouse
updated 5.3 years ago by 14k • written 5.4 years ago by ★ 2.6k
1
vote
1
reply
22k
views
Comment: C: Recommendations For Heterozygous Genome Assembly Software
updated 5.3 years ago by 44k • written 9.8 years ago by ★ 2.6k
0
votes
1
reply
4.5k
views
Comment: C: How to assess coverage of Ray metagenomic assemblies
updated 5.4 years ago by 44k • written 9.9 years ago by ★ 2.6k
1
vote
0
replies
19k
views
Comment: C: How To Combine Two Samtools Commands.
updated 5.4 years ago by 44k • written 9.3 years ago by ★ 2.6k
2
votes
2
replies
8.2k
views
Comment: C: please some one help me step by step i was really exhausted
updated 5.4 years ago by 44k • written 10.2 years ago by ★ 2.6k
1
vote
1
reply
8.2k
views
Comment: Comment: please some one help me step by step i was really exhausted
updated 3.0 years ago by 44k • written 10.2 years ago by ★ 2.6k
9
votes
3
replies
8.2k
views
Answer: A: please some one help me step by step i was really exhausted
updated 5.4 years ago by 44k • written 10.2 years ago by ★ 2.6k
0
votes
0
replies
4.6k
views
Comment: C: installation of artemis on linux redhat
updated 5.4 years ago by 44k • written 10.7 years ago by ★ 2.6k
1
vote
2
replies
11k
views
Comment: C: MrBayes: Implementing the LG model
updated 5.4 years ago by 44k • written 10.2 years ago by ★ 2.6k
1
vote
2
replies
11k
views
Comment: C: MrBayes: Implementing the LG model
updated 5.4 years ago by 44k • written 10.2 years ago by ★ 2.6k
4
votes
2
replies
11k
views
Answer: A: MrBayes: Implementing the LG model
updated 5.4 years ago by 44k • written 10.8 years ago by ★ 2.6k
0
votes
1
reply
21k
views
Comment: A: Pathway Enrichment Analysis, Clustering and Scoring with pathfindR
5.4 years ago by Adrian Pelin ★ 2.6k
1
vote
11
replies
4.7k
views
bedtools merge - removing features completly overlapped by other features
bedtools
updated 5.4 years ago by ▴ 40 • written 7.4 years ago by ★ 2.6k
0
votes
0
replies
5.6k
views
Answer: A: Ka/Ks (Or Dn/Ds) Calculation From Sequenced Transcriptome Contigs
5.5 years ago by Adrian Pelin ★ 2.6k
0
votes
1
reply
2.4k
views
Comment: C: Crazy high file size for human genome from Ensembl
5.5 years ago by Adrian Pelin ★ 2.6k
10
votes
3
replies
2.4k
views
Crazy high file size for human genome from Ensembl
Ensembl
updated 5.5 years ago by 24k • written 5.5 years ago by ★ 2.6k
0
votes
0
replies
1.7k
views
Comment: C: How can I reproduce features of signalp TMHMM and phobius?
5.5 years ago by Adrian Pelin ★ 2.6k
0
votes
1
reply
3.0k
views
Comment: C: List of human protein coding genes with given name (known function?)
5.5 years ago by Adrian Pelin ★ 2.6k
0
votes
1
reply
2.0k
views
Comment: C: Extracting reads mapping to CDS regions but not the first 45bp after ATG
5.5 years ago by Adrian Pelin ★ 2.6k
509 results • Page 1 of 11
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6