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719
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Comment: Comment: IGV read color ,what is inferred insert size and expected insert size mean?
8 months ago by Tao ▴ 40
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3
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719
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IGV read color ,what is inferred insert size and expected insert size mean?
IGV
updated 8 months ago by 147k • written 8 months ago by ▴ 40
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0
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591
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Answer: Answer: ERROR FILE EXTENSION
11 months ago by Tao ▴ 40
0
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0
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495
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Answer: Answer: filtering SAM/BAM to remove hits spanning short combined alignment lengths and l
11 months ago by Tao ▴ 40
1
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1
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661
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Comment: Comment: Bowtie mapping for single_end read
12 months ago by Tao ▴ 40
2
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2
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1.1k
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How to iterate through paired-end reads in pysam?
bam sam pysam samtools
updated 20 months ago by 44k • written 2.2 years ago by ▴ 40
0
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1
reply
549
views
I have two different libaries which were sequenced, How should I compare their library diversity?
bam sam
updated 20 months ago by 44k • written 2.5 years ago by ▴ 40
0
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1
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994
views
Comment: Comment: What's the difference between library diversity and unique molecules?
2.5 years ago by Tao ▴ 40
2
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4
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994
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What's the difference between library diversity and unique molecules?
bam sam
updated 20 months ago by 44k • written 2.6 years ago by ▴ 40
0
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0
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627
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Comment: Comment: Use CollectHsMetrics (Picard) ，and got HS_LIBRARY_SIZE is empty，Why is this happ
2.7 years ago by Tao ▴ 40
0
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2
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627
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CollectHsMetrics (Picard) HS_LIBRARY_SIZE is empty
picard-tools Picard
updated 17 months ago by 44k • written 2.7 years ago by ▴ 40
0
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1
reply
561
views
error of install gencore about libgcc-ng
gencore mamba conda
updated 2.7 years ago by 13k • written 2.7 years ago by ▴ 40
2
votes
1
reply
1.4k
views
What's the difference between bait coverage and target coverage of picard CollectHsMetrics?
picard
updated 2.7 years ago by 164k • written 2.7 years ago by ▴ 40
0
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1
reply
464
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How to randomly extract pair reads from bam file？
sam bam
updated 2.7 years ago by 164k • written 2.7 years ago by ▴ 40
0
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2
replies
1.9k
views
bcl2fastq error
bcl2fastq
updated 2.8 years ago by 21k • written 2.8 years ago by ▴ 40
0
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2
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977
views
are there some software to compute depth？
bam sam depth
updated 20 months ago by 44k • written 2.9 years ago by ▴ 40
1
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1
reply
724
views
What is the principle of samtools depth?
samtools depth
updated 17 months ago by 44k • written 2.9 years ago by ▴ 40
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0
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2.1k
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Comment: Comment: why those reads don't contain 0x2
3.1 years ago by Tao ▴ 40
0
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2
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2.1k
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Comment: Comment: why those reads don't contain 0x2
3.1 years ago by Tao ▴ 40
5
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8
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2.1k
views
why those reads don't contain 0x2
bam sam
updated 20 months ago by 44k • written 3.1 years ago by ▴ 40
0
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0
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2.1k
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Comment: Comment: why those reads don't contain 0x2
3.1 years ago by Tao ▴ 40
0
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1
reply
2.1k
views
Comment: Comment: why those reads don't contain 0x2
3.1 years ago by Tao ▴ 40
0
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0
replies
1.7k
views
Comment: Comment: what is bam format file flag 0x2 mean?
3.2 years ago by Tao ▴ 40
2
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3
replies
1.7k
views
what is bam format file flag 0x2 mean?
bam flag sam
updated 2.4 years ago by ▴ 10 • written 3.2 years ago by ▴ 40
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