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Comment: Comment: Linkage Disequilibrium with Plink
18 months ago by chrchang523 11k
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1.4k
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Answer: Answer: Linkage Disequilibrium with Plink
18 months ago by chrchang523 11k
2
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2.7k
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Answer: Answer: KING kinship inference error
18 months ago by chrchang523 11k
1
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0
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886
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Answer: Answer: Where do I get a large reference VCF?
19 months ago by chrchang523 11k
1
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1
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1.1k
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Comment: Comment: PLINK Error: Invalid QUAL value on line
19 months ago by chrchang523 11k
1
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1
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1.1k
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Answer: Answer: PLINK Error: Invalid QUAL value on line
19 months ago by chrchang523 11k
2
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0
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943
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Answer: Answer: Calculate the kinship matrix from NGS data
19 months ago by chrchang523 11k
0
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0
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595
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Answer: Answer: invalid --hwe parameter sequence error when doing QC
21 months ago by chrchang523 11k
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0
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1.5k
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Answer: Answer: make BED file from existing BIM and FAM files
21 months ago by chrchang523 11k
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1
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2.5k
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Comment: Comment: PLINK2 selecting variants based on INFO score
21 months ago by chrchang523 11k
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1
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2.5k
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Comment: Comment: PLINK2 selecting variants based on INFO score
21 months ago by chrchang523 11k
0
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1
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2.5k
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Comment: Comment: PLINK2 selecting variants based on INFO score
21 months ago by chrchang523 11k
1
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1
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3.4k
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Answer: Answer: VCF to Plink files
22 months ago by chrchang523 11k
2
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1
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938
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Answer: Answer: drop duplicate insertion deletions in VCF at same position while keeping one
22 months ago by chrchang523 11k
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0
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2.0k
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Comment: Comment: High ref mismatch rate after liftOver from 23andme hg19 to hg38
22 months ago by chrchang523 11k
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1
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5.6k
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Comment: Comment: PLINK --geno and --mind
22 months ago by chrchang523 11k
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1
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5.6k
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Comment: Comment: PLINK --geno and --mind
22 months ago by chrchang523 11k
1
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1
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5.6k
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Answer: Answer: PLINK --geno and --mind
updated 22 months ago by 44k • written 22 months ago by 11k
1
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1
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1.6k
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Answer: Answer: How to correct the long variants ID error?
22 months ago by chrchang523 11k
0
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0
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1.4k
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Comment: Comment: PCA projection with --score plink2.sscore output: what are the ALLELE_CT & NAMED
22 months ago by chrchang523 11k
1
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1
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1.4k
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Comment: Comment: PCA projection with --score plink2.sscore output: what are the ALLELE_CT & NAMED
22 months ago by chrchang523 11k
1
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1
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9.0k
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Comment: Comment: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
22 months ago by chrchang523 11k
0
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1
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9.0k
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Comment: Comment: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
23 months ago by chrchang523 11k
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0
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1.3k
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Comment: Comment: Plink - running too slow.
2.0 years ago by chrchang523 11k
0
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1
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1.3k
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Comment: Comment: Plink - running too slow.
2.0 years ago by chrchang523 11k
1
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0
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2.0k
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Answer: Answer: How to measure pairwise genetic distance in all samples of a VCF file
2.0 years ago by chrchang523 11k
4
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2
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1.6k
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Answer: Answer: long view SNPs in vcf file
2.1 years ago by chrchang523 11k
1
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0
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764
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Answer: Answer: Calculate missing genotypes per sample with plink2
2.1 years ago by chrchang523 11k
0
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0
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2.1k
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Answer: Answer: PLINK1.9 Segmentation fault (core dumped)
2.1 years ago by chrchang523 11k
1
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0
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2.1k
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Comment: Comment: PLINK1.9 Segmentation fault (core dumped)
2.1 years ago by chrchang523 11k
2
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0
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29k
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Comment: Comment: Best way to query VCF for specific variants
2.1 years ago by chrchang523 11k
0
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0
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557
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Comment: Comment: GWAS with x and y chrosome files plink2
2.1 years ago by chrchang523 11k
2
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2
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1.6k
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Answer: Answer: PLINK p value returning NA
2.1 years ago by chrchang523 11k
1
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1
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3.3k
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Comment: Comment: Error in converting vcf file to plink format
2.2 years ago by chrchang523 11k
2
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1
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2.3k
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Comment: Comment: PLINK - individual variance with the SNPs weights
2.2 years ago by chrchang523 11k
1
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1
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2.3k
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Comment: Comment: PLINK - individual variance with the SNPs weights
2.2 years ago by chrchang523 11k
0
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1
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2.3k
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Comment: Comment: PLINK - individual variance with the SNPs weights
2.2 years ago by chrchang523 11k
0
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0
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1.6k
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Comment: Comment: plink logistic regression error
2.2 years ago by chrchang523 11k
1
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1
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1.6k
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Comment: Comment: plink logistic regression error
2.2 years ago by chrchang523 11k
0
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1
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1.6k
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Comment: Comment: plink logistic regression error
2.2 years ago by chrchang523 11k
2
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0
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1.0k
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Answer: Answer: Better splitting of mutliallelic sites then bcftools norm --m-any
2.2 years ago by chrchang523 11k
0
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1
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1000
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Answer: Answer: plink2 fails to calculate allele frequency
2.2 years ago by chrchang523 11k
1
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1
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1.7k
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Comment: Comment: SNP array plink to VCF validation issue
2.2 years ago by chrchang523 11k
0
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1
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1.7k
views
Comment: Comment: SNP array plink to VCF validation issue
2.2 years ago by chrchang523 11k
1
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1
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1.2k
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Answer: Answer: Using a phenotype file with several phenotype columns- PLINK2
2.3 years ago by chrchang523 11k
1
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0
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2.9k
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Comment: Comment: Plink : Variant names are limited to 16000 characters
2.3 years ago by chrchang523 11k
3
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1
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1.7k
views
Answer: Answer: SNP array plink to VCF validation issue
2.3 years ago by chrchang523 11k
1
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0
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2.9k
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Comment: Comment: Plink : Variant names are limited to 16000 characters
2.3 years ago by chrchang523 11k
1
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2
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2.9k
views
Answer: Answer: Plink : Variant names are limited to 16000 characters
2.3 years ago by chrchang523 11k
0
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1
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2.8k
views
Comment: Comment: High proportion of non-biallelic SNPs in dbSNP 155 vs 144
2.3 years ago by chrchang523 11k
907 results • Page 2 of 19
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