Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
3
votes
1
reply
1.1k
views
Answer: Answer: PLINK .ped file from vcf file with 2 alleles
2.7 years ago by chrchang523 11k
2
votes
1
reply
3.3k
views
Answer: Answer: (Plink) Sex as a covariate: What's the coding for male/female?
2.7 years ago by chrchang523 11k
0
votes
1
reply
4.0k
views
Comment: Comment: Computing allele frequencies per individual for a set of SNPs in PLINK
2.7 years ago by chrchang523 11k
0
votes
3
replies
4.0k
views
Comment: Comment: Computing allele frequencies per individual for a set of SNPs in PLINK
2.7 years ago by chrchang523 11k
0
votes
1
reply
4.0k
views
Comment: Comment: Computing allele frequencies per individual for a set of SNPs in PLINK
2.7 years ago by chrchang523 11k
0
votes
1
reply
4.0k
views
Comment: Comment: Computing allele frequencies per individual for a set of SNPs in PLINK
2.7 years ago by chrchang523 11k
0
votes
1
reply
4.0k
views
Comment: Comment: Computing allele frequencies per individual for a set of SNPs in PLINK
2.7 years ago by chrchang523 11k
0
votes
0
replies
707
views
Answer: Answer: ".glm.firth.hybrid" output file in plink2 does not give correct CASE_ALLELE_CT v
2.7 years ago by chrchang523 11k
0
votes
2
replies
4.0k
views
Answer: Answer: Computing allele frequencies per individual for a set of SNPs in PLINK
2.7 years ago by chrchang523 11k
0
votes
0
replies
1.8k
views
Comment: Comment: Plink Error: --recode does not yet support multipass recoding of very large file
2.7 years ago by chrchang523 11k
0
votes
1
reply
1.8k
views
Comment: Comment: Plink Error: --recode does not yet support multipass recoding of very large file
2.7 years ago by chrchang523 11k
1
vote
0
replies
1.8k
views
Answer: Answer: Plink Error: --recode does not yet support multipass recoding of very large file
2.7 years ago by chrchang523 11k
0
votes
0
replies
705
views
Answer: Answer: Merging more than two files with plink
2.8 years ago by chrchang523 11k
3
votes
0
replies
1.7k
views
Answer: Answer: how to convert from hap/legend to VCF
2.8 years ago by chrchang523 11k
0
votes
0
replies
5.2k
views
Answer: Answer: Plink 2 user error converting .bgen to bcf
2.8 years ago by chrchang523 11k
1
vote
1
reply
943
views
Answer: Answer: Multiple samples in PLINK
2.9 years ago by chrchang523 11k
0
votes
0
replies
805
views
Answer: Answer: plink vcf
2.9 years ago by chrchang523 11k
1
vote
0
replies
1.5k
views
Answer: Answer: Change ALT/REF allele in plink
2.9 years ago by chrchang523 11k
0
votes
1
reply
1.5k
views
Answer: Answer: Plink2.0 unrecognized flag: --het
2.9 years ago by chrchang523 11k
1
vote
1
reply
1.0k
views
Answer: Answer: Use plink filter --geno on cases and controls separately, within current analys
2.9 years ago by chrchang523 11k
0
votes
0
replies
1.4k
views
Comment: Comment: Plink Error
2.9 years ago by chrchang523 11k
0
votes
1
reply
1.4k
views
Answer: Answer: Plink Error
2.9 years ago by chrchang523 11k
1
vote
1
reply
7.7k
views
Comment: Comment: Why would you need to specify `--keep-allele-order` and `--a2-allele` when writi
2.9 years ago by chrchang523 11k
0
votes
0
replies
681
views
Comment: Comment: SNP extraction
3.0 years ago by chrchang523 11k
0
votes
0
replies
1.9k
views
Answer: Answer: deflated QQ plot but lambda >1
3.1 years ago by chrchang523 11k
1
vote
0
replies
1.4k
views
Comment: Comment: How to import dosage information to plink binary files?
3.1 years ago by chrchang523 11k
3
votes
0
replies
4.6k
views
Answer: Answer: Can someone explain PLINK allele REF/ALT management strategy?
3.1 years ago by chrchang523 11k
1
vote
1
reply
6.2k
views
Comment: Comment: PLINK dosage data - convert and/or read in R
3.1 years ago by chrchang523 11k
0
votes
1
reply
3.4k
views
Answer: Answer: PLINK basic command line usage
3.2 years ago by chrchang523 11k
4
votes
0
replies
931
views
Answer: Answer: Plink genome flag error
3.2 years ago by chrchang523 11k
0
votes
0
replies
1.8k
views
Answer: Answer: Plink --merge-list only outputting fam
3.2 years ago by chrchang523 11k
1
vote
0
replies
718
views
Answer: Answer: Data Storage in Plink Format
3.2 years ago by chrchang523 11k
2
votes
0
replies
1.0k
views
Answer: Answer: Filter duplicate ID from PLINK file
3.3 years ago by chrchang523 11k
0
votes
0
replies
2.3k
views
Comment: Comment: PLINK --lasso Issue ('Warning: No Phenotypes Present') even with a covar file i
3.3 years ago by chrchang523 11k
0
votes
1
reply
2.3k
views
Comment: Comment: PLINK --lasso Issue ('Warning: No Phenotypes Present') even with a covar file i
3.3 years ago by chrchang523 11k
0
votes
1
reply
2.3k
views
Answer: Answer: PLINK --lasso Issue ('Warning: No Phenotypes Present') even with a covar file i
3.3 years ago by chrchang523 11k
0
votes
1
reply
3.7k
views
Comment: Comment: Problem merging data in plink
3.3 years ago by chrchang523 11k
0
votes
1
reply
3.7k
views
Comment: Comment: Problem merging data in plink
3.3 years ago by chrchang523 11k
0
votes
1
reply
3.7k
views
Comment: Comment: Problem merging data in plink
3.3 years ago by chrchang523 11k
1
vote
1
reply
3.7k
views
Answer: Answer: Problem merging data in plink
3.3 years ago by chrchang523 11k
0
votes
0
replies
9.4k
views
Comment: Comment: Calculate population allele frequencies from a vcf file including multiple popul
3.3 years ago by chrchang523 11k
1
vote
1
reply
1.8k
views
Comment: Comment: Merge files in Plink
3.3 years ago by chrchang523 11k
1
vote
1
reply
1.8k
views
Comment: Comment: Merge files in Plink
3.3 years ago by chrchang523 11k
1
vote
1
reply
1.8k
views
Answer: Answer: Merge files in Plink
3.3 years ago by chrchang523 11k
0
votes
1
reply
9.4k
views
Comment: Comment: Calculate population allele frequencies from a vcf file including multiple popul
3.3 years ago by chrchang523 11k
1
vote
0
replies
2.0k
views
Comment: Comment: formatting error: Calculate LD matrix from bgen file
3.3 years ago by chrchang523 11k
0
votes
0
replies
1.7k
views
Answer: Answer: extract list of SNPs from multiple chr{1:22}.bgen files using plink2
3.3 years ago by chrchang523 11k
0
votes
1
reply
2.0k
views
Answer: Answer: formatting error: Calculate LD matrix from bgen file
3.3 years ago by chrchang523 11k
2
votes
1
reply
3.3k
views
Comment: Comment: PLINK ASSOC : Skipping --assoc/--model since less than two phenotypes are prese
3.3 years ago by chrchang523 11k
0
votes
1
reply
3.3k
views
Answer: Answer: PLINK ASSOC : Skipping --assoc/--model since less than two phenotypes are prese
3.3 years ago by chrchang523 11k
907 results • Page 4 of 19
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6