Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
656
views
Comment: Comment: Open question: What's the best way to share an R environement?
11 months ago by Ondina ▴ 100
6
votes
3
replies
656
views
Open question: What's the best way to share an R environement?
R environement conda reproductibility
updated 11 months ago by 88k • written 11 months ago by ▴ 100
0
votes
0
replies
338
views
Mutual information method for gene markers identification ???
scRNA-seq mutual-information
updated 17 months ago by 45k • written 17 months ago by ▴ 100
0
votes
1
reply
1.1k
views
PyMOL: how to list all selection names?
pymol
updated 21 months ago by ★ 2.1k • written 21 months ago by ▴ 100
0
votes
0
replies
5.1k
views
Comment: Comment: Set up label.color with the same colors as the cluster colors in Seurat DimPlot(
23 months ago by Ondina ▴ 100
6
votes
7
replies
5.1k
views
Set up label.color with the same colors as the cluster colors in Seurat DimPlot() ?
seurat scRNA-seq
23 months ago by Ondina ▴ 100
1
vote
0
replies
5.1k
views
Comment: Comment: Set up label.color with the same colors as the cluster colors in Seurat DimPlot(
23 months ago by Ondina ▴ 100
0
votes
1
reply
5.1k
views
Comment: Comment: Set up label.color with the same colors as the cluster colors in Seurat DimPlot(
23 months ago by Ondina ▴ 100
1
vote
0
replies
1.3k
views
Comment: Comment: Samtools sort error: [pretty_header] invalid header
24 months ago by Ondina ▴ 100
1
vote
1
reply
1.3k
views
Comment: Comment: Samtools sort error: [pretty_header] invalid header
24 months ago by Ondina ▴ 100
0
votes
1
reply
1.3k
views
Comment: Comment: Samtools sort error: [pretty_header] invalid header
24 months ago by Ondina ▴ 100
4
votes
5
replies
1.3k
views
Samtools sort error: [pretty_header] invalid header
sam RNA-seq bam samtools
updated 24 months ago by 45k • written 24 months ago by ▴ 100
1
vote
0
replies
960
views
Answer: Answer: MatrisomeDB down?
2.4 years ago by Ondina ▴ 100
0
votes
1
reply
960
views
Comment: Comment: MatrisomeDB down?
2.4 years ago by Ondina ▴ 100
3
votes
4
replies
960
views
MatrisomeDB down?
matrisome database
updated 2.4 years ago by 152k • written 2.4 years ago by ▴ 100
2
votes
1
reply
1.4k
views
Best method for small cluster (<100 cells) differential expression analysis in single-cell analysis
differential single-cell seurat expression
2.5 years ago by Ondina ▴ 100
0
votes
0
replies
3.6k
views
Comment: Comment: Searching for a way to plot Seurat style equivalent dotplot for gene expression
2.6 years ago by Ondina ▴ 100
0
votes
0
replies
3.6k
views
Comment: Comment: Searching for a way to plot Seurat style equivalent dotplot for gene expression
2.6 years ago by Ondina ▴ 100
5
votes
5
replies
3.6k
views
Searching for a way to plot Seurat style equivalent dotplot for gene expression with DESeq on RNA-seq data
dotplot DESeq rna-seq visualisation
2.6 years ago by Ondina ▴ 100
12
votes
5
replies
3.5k
views
scRNA-seq: Which is the best method for computing the % of similarity between two clusters using R?
RNAseq singlecell clustering
updated 2.8 years ago by ▴ 800 • written 3.4 years ago by ▴ 100
0
votes
0
replies
1.1k
views
Comment: Comment: GEO Query error
2.9 years ago by Ondina ▴ 100
2
votes
2
replies
1.1k
views
GEO Query error
GEOQuery
2.9 years ago by Ondina ▴ 100
4
votes
2
replies
2.0k
views
Is there a way to easily export a .mtx file from a seurat object and use it in the scNetViz app for Cytoscape?
conversion cytoscape singlecell format seurat
updated 3.0 years ago by ▴ 650 • written 3.0 years ago by ▴ 100
0
votes
0
replies
822
views
Comment: Comment: getting a job only with masters degree
3.3 years ago by Ondina ▴ 100
0
votes
0
replies
3.5k
views
Comment: Comment: scRNA-seq: Which is the best method for computing the % of similarity between tw
3.4 years ago by Ondina ▴ 100
0
votes
0
replies
7.2k
views
Comment: Comment: How to compare two Seurat object (sample) in order to find top markers?
3.5 years ago by Ondina ▴ 100
2
votes
1
reply
7.2k
views
Answer: Answer: How to compare two Seurat object (sample) in order to find top markers?
3.6 years ago by Ondina ▴ 100
2
votes
2
replies
1.6k
views
Volcano 3D plot on single cell seurat data ?
single-cell volcano3d seurat
3.6 years ago by Ondina ▴ 100
1
vote
0
replies
1.6k
views
Answer: Answer: Volcano 3D plot on single cell seurat data ?
3.6 years ago by Ondina ▴ 100
0
votes
0
replies
2.0k
views
Comment: Comment: cellranger count help
3.7 years ago by Ondina ▴ 100
3
votes
4
replies
4.0k
views
Searching expression for one particular gene in Seurat object issue (Seurat, R)
Seurat scRNA-seq R
updated 3.8 years ago by ★ 19k • written 3.8 years ago by ▴ 100
0
votes
1
reply
4.0k
views
Comment: Comment: Searching expression for one particular gene in Seurat object issue (Seurat, R)
3.8 years ago by Ondina ▴ 100
0
votes
0
replies
24k
views
Comment: Comment: subsetting out cells from seurat object based on expression of 1 gene
3.8 years ago by Ondina ▴ 100
0
votes
1
reply
24k
views
Comment: Comment: subsetting out cells from seurat object based on expression of 1 gene
3.8 years ago by Ondina ▴ 100
0
votes
0
replies
3.5k
views
Comment: Comment: Filter DGElist object: keep only genes expressed in sample at the same time as a
3.8 years ago by Ondina ▴ 100
0
votes
1
reply
3.5k
views
Comment: Comment: Filter DGElist object: keep only genes expressed in sample at the same time as a
3.8 years ago by Ondina ▴ 100
0
votes
0
replies
3.5k
views
Comment: Comment: Filter DGElist object: keep only genes expressed in sample at the same time as a
3.8 years ago by Ondina ▴ 100
0
votes
1
reply
3.5k
views
Comment: Comment: Filter DGElist object: keep only genes expressed in sample at the same time as a
3.8 years ago by Ondina ▴ 100
0
votes
1
reply
3.5k
views
Comment: Comment: Filter DGElist object: keep only genes expressed in sample at the same time as a
updated 3.8 years ago by 152k • written 3.8 years ago by ▴ 100
3
votes
9
replies
3.5k
views
Filter DGElist object: keep only genes expressed in sample at the same time as a particular gene of interest
edger RNA-seq dgelist R
3.8 years ago by Ondina ▴ 100
40 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6