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clarification on rfmix parameters
local ancestry genotype rfmix
2.6 years ago by pabe ▴ 30
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Answer: Answer: SMARTPCA
2.7 years ago by pabe ▴ 30
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944
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Comment: Comment: Plink error
2.7 years ago by pabe ▴ 30
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1.9k
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Answer: Answer: difference between different field info in vcf file format
2.7 years ago by pabe ▴ 30
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Comment: Comment: How I do lift over a Plink bim file from Hg18 to Hg19.
2.7 years ago by pabe ▴ 30
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Retain non-variable sites after phasing with shapeit4
phasing vcf shapeit awk shapeit4
2.8 years ago by pabe ▴ 30
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974
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Forum: Best practices for merging vcfs with different positions + different samples?
vcf bcftools genotypes
updated 2.4 years ago by 45k • written 2.9 years ago by ▴ 30
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Answer: Answer: Workshop for population genomics
3.6 years ago by pabe ▴ 30
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971
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extract IDs from each population in PLINK .fam file and export to .txt separately
plink fam bash
3.6 years ago by pabe ▴ 30
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4.9k
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Comment: Comment: Interpreting bcftools isec output
3.7 years ago by pabe ▴ 30
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4.9k
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Interpreting bcftools isec output
bcftools isec intersection vcf
updated 3.4 years ago by 45k • written 3.7 years ago by ▴ 30
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