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3
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0
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16k
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Answer: Answer: Easiest way to convert python script to web application
updated 2.3 years ago by 44k • written 8.9 years ago by ▴ 430
0
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0
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2.5k
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Comment: C: Simulating single end reads with dwgsim
updated 5.0 years ago by 44k • written 9.0 years ago by ▴ 430
0
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0
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1.6k
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Comment: C: about download on NCBI
updated 5.0 years ago by 44k • written 9.0 years ago by ▴ 430
7
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8
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4.6k
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Diffbind - Very high proportion of significant peaks
diffbind atac-seq deseq2
6.6 years ago by kautilya ▴ 430
0
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0
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4.6k
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Comment: C: Diffbind - Very high proportion of significant peaks
6.6 years ago by kautilya ▴ 430
0
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0
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4.6k
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Comment: C: Diffbind - Very high proportion of significant peaks
6.6 years ago by kautilya ▴ 430
0
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0
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4.6k
views
Comment: C: Diffbind - Very high proportion of significant peaks
6.6 years ago by kautilya ▴ 430
0
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1
reply
4.6k
views
Comment: C: Diffbind - Very high proportion of significant peaks
6.6 years ago by kautilya ▴ 430
0
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0
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24k
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Comment: C: Fold Change In R
6.7 years ago by kautilya ▴ 430
2
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1
reply
2.9k
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Comment: C: DESEQ analysis contain rlog formation?
6.7 years ago by kautilya ▴ 430
0
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1
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24k
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Comment: C: Fold Change In R
6.7 years ago by kautilya ▴ 430
1
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2
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24k
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Comment: C: Fold Change In R
6.8 years ago by kautilya ▴ 430
5
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2
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3.3k
views
Utility of Kallisto bootstraps when not using sleuth downstream
kallisto RNA-Seq
updated 6.8 years ago by 88k • written 6.8 years ago by ▴ 430
0
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1
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1.8k
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Comment: C: Looking for an open-source programmer, Yokohama, Japan
7.7 years ago by kautilya ▴ 430
14
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15
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10k
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Weir And Cockerham Fst from PLINK(bed/bim/fam) input files
plink fst gwas
updated 2.7 years ago by 44k • written 10.4 years ago by ▴ 430
0
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2
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2.5k
views
Simulating single end reads with dwgsim
ngs dwgsim simulation
updated 9.0 years ago by ▴ 580 • written 9.0 years ago by ▴ 430
2
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1
reply
26k
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Answer: Answer: Variant call format (VCF) file, how to get statistics per sample?
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 430
0
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1
reply
3.7k
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Comment: Comment: How to get Population Genotype Frequency from 1000 genomes Perl API
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 430
1
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1
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2.4k
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Answer: Answer: how to assign snp to gene and gene to pathway using KEGG database ? any software
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 430
0
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1
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2.7k
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Answer: Answer: Translating bulk mutation .bed or .vcf data into aa protein fasta sequences
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 430
8
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3
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3.6k
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How To Handle Ns In The Middle Of Reads
fastqc qc
updated 2.4 years ago by 44k • written 10.9 years ago by ▴ 430
0
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0
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4.7k
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Comment: Comment: "Error:Could not open map file: --out" in vcftools
updated 2.5 years ago by 44k • written 9.6 years ago by ▴ 430
0
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0
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1.8k
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Answer: A: mapping snps to fucntional class and genes
9.7 years ago by kautilya ▴ 430
1
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0
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8.9k
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Comment: C: color a sequence alignment
9.7 years ago by kautilya ▴ 430
5
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0
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1.9k
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Answer: A: Which city of China are CHS at 1000genomes from?
9.7 years ago by kautilya ▴ 430
0
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1
reply
4.4k
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Comment: C: What are SNP effects? in terms of SNPeff output file
9.7 years ago by kautilya ▴ 430
4
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1
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4.4k
views
Answer: A: What are SNP effects? in terms of SNPeff output file
9.7 years ago by kautilya ▴ 430
2
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0
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2.6k
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Answer: A: whre we can get BRCA1 and 2 SNPs data for indian population?
9.7 years ago by kautilya ▴ 430
4
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0
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4.4k
views
Answer: Answer: get protein sequence from ID
updated 2.5 years ago by 44k • written 9.7 years ago by ▴ 430
2
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1
reply
2.3k
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Effect of Non-Cannonical splice site on impact of variation
snp vep SNP loftee snpeff
updated 9.8 years ago by 24k • written 9.8 years ago by ▴ 430
0
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1
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3.4k
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Comment: Comment: GWAS with KEGG pathway analysis
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 430
2
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1
reply
3.1k
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Answer: Answer: dbSNP: getting the population/country information from rs dbSNP id's
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 430
0
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2
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3.3k
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Answer: C: BAM file interpretation and consensus creation
9.8 years ago by kautilya ▴ 430
7
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2
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4.5k
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Mapping Variants to Protein Seqeunces
SNP protein annotation variant
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 430
0
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0
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2.0k
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Answer: Answer: SNP annotation in sequence
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 430
0
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0
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2.1k
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Comment: Comment: Strategies to shortlist True LoF mutations
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 430
2
votes
2
replies
2.1k
views
Strategies to shortlist True LoF mutations
SNP next-gen-sequencing loss-of-function
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 430
2
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0
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3.9k
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Answer: Answer: QC Sequence Data from VCF
updated 3.1 years ago by 44k • written 10.4 years ago by ▴ 430
1
vote
0
replies
10k
views
Comment: C: Weir And Cockerham Fst from PLINK(bed/bim/fam) input files
10.4 years ago by kautilya ▴ 430
2
votes
0
replies
7.2k
views
Comment: Comment: Doesn't Base Quality Score Recalibration degrade sensitivity in heavily mutated
updated 3.1 years ago by 44k • written 10.4 years ago by ▴ 430
1
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1
reply
10k
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Comment: C: Weir And Cockerham Fst from PLINK(bed/bim/fam) input files
10.4 years ago by kautilya ▴ 430
1
vote
0
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4.7k
views
Answer: A: Optimized parameters for trimming single-end reads using Trimmomatic
10.4 years ago by kautilya ▴ 430
0
votes
1
reply
10k
views
Comment: C: Weir And Cockerham Fst from PLINK(bed/bim/fam) input files
10.4 years ago by kautilya ▴ 430
1
vote
0
replies
10k
views
Comment: C: Weir And Cockerham Fst from PLINK(bed/bim/fam) input files
10.4 years ago by kautilya ▴ 430
0
votes
0
replies
3.3k
views
Comment: C: What are F2 variants?
10.5 years ago by kautilya ▴ 430
2
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2
replies
3.3k
views
What are F2 variants?
SNP ngs
updated 3.1 years ago by 44k • written 10.5 years ago by ▴ 430
1
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0
replies
3.6k
views
Comment: C: How To Handle Ns In The Middle Of Reads
10.9 years ago by kautilya ▴ 430
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