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Answer: Answer: I would like to exclude rRNA in RSEM and quantify other genes.
10 months ago by jv ★ 1.8k
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800
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Comment: Comment: Create Signature Matrix Cibersort
10 months ago by jv ★ 1.8k
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0
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712
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Answer: Answer: Enrichement with clusterProfiler and biomartr
10 months ago by jv ★ 1.8k
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0
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712
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Comment: Comment: Enrichement with clusterProfiler and biomartr
10 months ago by jv ★ 1.8k
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1
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632
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Comment: Comment: Estimating the similarity of an RNA-seq sample based on a reference expression p
10 months ago by jv ★ 1.8k
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0
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1.2k
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Comment: Comment: Correlate number of cells with gene expression of one gene in scRNA Seq
10 months ago by jv ★ 1.8k
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0
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1.2k
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Comment: Comment: Correlate number of cells with gene expression of one gene in scRNA Seq
10 months ago by jv ★ 1.8k
1
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1
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1.2k
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Comment: Comment: Correlate number of cells with gene expression of one gene in scRNA Seq
10 months ago by jv ★ 1.8k
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2
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1.2k
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Answer: Answer: Correlate number of cells with gene expression of one gene in scRNA Seq
10 months ago by jv ★ 1.8k
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0
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2.2k
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Comment: Comment: Install STAR on MacBook Pro M1
10 months ago by jv ★ 1.8k
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0
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2.2k
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Answer: Answer: Install STAR on MacBook Pro M1
10 months ago by jv ★ 1.8k
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1
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518
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Comment: Comment: From nucleotide or proteine sequences to EC number using biopython
10 months ago by jv ★ 1.8k
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0
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1.2k
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Comment: Comment: Quantile normalisation on RNAseq with substantial differences on sample size
10 months ago by jv ★ 1.8k
1
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1
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791
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Comment: Comment: Obtain fitted data from DESeq2
10 months ago by jv ★ 1.8k
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0
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664
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Comment: Comment: sample data for plant RNA seq analysis
11 months ago by jv ★ 1.8k
2
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1
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1.1k
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Comment: Comment: No genes mapped in clusterprofiler gseGO
11 months ago by jv ★ 1.8k
1
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1
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1.1k
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Comment: Comment: No genes mapped in clusterprofiler gseGO
11 months ago by jv ★ 1.8k
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1
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1.1k
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Comment: Comment: No genes mapped in clusterprofiler gseGO
11 months ago by jv ★ 1.8k
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0
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4.3k
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Comment: Comment: No gene can be mapped
11 months ago by jv ★ 1.8k
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1
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472
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Comment: Comment: Ribo-Seq Samtools pileup
11 months ago by jv ★ 1.8k
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0
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1.8k
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Comment: Comment: Error in schicexplorer's hicbuildmatrix
11 months ago by jv ★ 1.8k
0
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1
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1.8k
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Comment: Comment: Error in schicexplorer's hicbuildmatrix
11 months ago by jv ★ 1.8k
0
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1
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1.8k
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Answer: Answer: Error in schicexplorer's hicbuildmatrix
11 months ago by jv ★ 1.8k
1
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1
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1.2k
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Answer: Answer: Getting gene counts from transcript counts using R package 'tximport'
11 months ago by jv ★ 1.8k
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0
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504
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Comment: Comment: Database for immunological pathways
11 months ago by jv ★ 1.8k
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0
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1.1k
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Answer: Answer: R ComplexHeatmap - Adujusting the cell size in heatmap
11 months ago by jv ★ 1.8k
1
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1
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1.7k
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Comment: Comment: Finding differentially expressed genes between Seurat clusters
11 months ago by jv ★ 1.8k
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1
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1.8k
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Comment: Comment: Error in schicexplorer's hicbuildmatrix
11 months ago by jv ★ 1.8k
2
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0
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1.7k
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Comment: Comment: How to remove center population from seurat cluster
11 months ago by jv ★ 1.8k
1
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0
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916
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Comment: Comment: ORA with clusterProfiler
11 months ago by jv ★ 1.8k
1
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1
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1.0k
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Comment: Comment: Overlapping and merging ChIP-seq peaks
11 months ago by jv ★ 1.8k
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0
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428
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Answer: Answer: Need Help Mapping Probe IDs to Gene Symbols
11 months ago by jv ★ 1.8k
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1
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1.7k
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Comment: Comment: Finding differentially expressed genes between Seurat clusters
11 months ago by jv ★ 1.8k
0
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1
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1.8k
views
Comment: Comment: i ues schicexplorer's hicbuildmatrix code complains that two sam files do not ha
11 months ago by jv ★ 1.8k
1
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0
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611
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Comment: Comment: KEGG DATABASE
11 months ago by jv ★ 1.8k
0
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0
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756
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Answer: Answer: RNA seq
11 months ago by jv ★ 1.8k
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0
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483
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Comment: Comment: Contrasts in R
11 months ago by jv ★ 1.8k
0
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0
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1.2k
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Answer: Answer: Can I use TCGA-LUAD RNAseq count that had already normalized by RSEM in Limma-vo
updated 11 months ago by 44k • written 11 months ago by ★ 1.8k
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0
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1.2k
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Comment: Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
12 months ago by jv ★ 1.8k
2
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1
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1.0k
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Answer: Answer: Is there a need to batch correct FPKM or TPM values for within sample comparison
12 months ago by jv ★ 1.8k
1
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0
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700
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Comment: Comment: R ComplexHeatmap - Dividing Column Annotation into Distinct Y-Axis Scales
12 months ago by jv ★ 1.8k
0
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1
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700
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Comment: Comment: R ComplexHeatmap - Dividing Column Annotation into Distinct Y-Axis Scales
12 months ago by jv ★ 1.8k
0
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1
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1.5k
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Comment: Comment: Data preparation for a ML model
12 months ago by jv ★ 1.8k
0
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0
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480
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Answer: Answer: DESeq2 with unbalanced dataset and multifactor design
12 months ago by jv ★ 1.8k
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2
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1.5k
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Comment: Comment: Data preparation for a ML model
12 months ago by jv ★ 1.8k
1
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1
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1.5k
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Comment: Comment: Data preparation for a ML model
12 months ago by jv ★ 1.8k
0
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0
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936
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Comment: Comment: Selecting a subset of MSigDB database for GSEA
12 months ago by jv ★ 1.8k
1
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1
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1.5k
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Comment: Comment: scRNA-seq quality control
12 months ago by jv ★ 1.8k
3
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0
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671
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Answer: Answer: Database of Mapped Data for Single Cell Sequencing
12 months ago by jv ★ 1.8k
0
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0
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800
views
Comment: Comment: WGCNA
12 months ago by jv ★ 1.8k
382 results • Page 2 of 8
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