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604
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VG Giraffe does not map reads < 39 bases
mapping
variation-graph
giraffe
vg
updated 11 weeks ago by
Ram
44k • written 2.8 years ago by
jdru
▴ 10
0
votes
0
replies
398
views
VG Giraffe Mapping to a Single Connected Component
graph
vg
pangenome
giraffe
18 months ago by
jdru
▴ 10
0
votes
0
replies
419
views
Where to find Y Chromosome Haplogroup Sequences
chromosome-Y
haplogroup
updated 23 months ago by
Ram
44k • written 2.2 years ago by
jdru
▴ 10
0
votes
0
replies
417
views
HSD to FASTA Converter?
Haplogrep
FASTA
HSD
haplogroup
2.7 years ago by
jdru
▴ 10
1
vote
2
replies
1.2k
views
Constructing a vg graph from MSA with a large number of sequences
graph
msa
variation
vg
2.9 years ago by
jdru
▴ 10
0
votes
0
replies
1.2k
views
Answer:
Answer: Constructing a vg graph from MSA with a large number of sequences
2.9 years ago by
jdru
▴ 10
0
votes
0
replies
494
views
Find which paths traverse a given node/edge in a vg graph
graph
paths
variation
vg
3.0 years ago by
jdru
▴ 10
0
votes
0
replies
474
views
How does vg construct -M runtime scale with number of sequences?
sequence
multiple
alignment
vg
3.0 years ago by
jdru
▴ 10
1
vote
3
replies
972
views
Runtime of muscle -refine
multiple
sequence
msa
alignment
muscle
updated 3.0 years ago by
Michael
55k • written 3.1 years ago by
jdru
▴ 10
0
votes
1
reply
972
views
Comment:
Comment: Runtime of muscle -refine
3.0 years ago by
jdru
▴ 10
0
votes
1
reply
691
views
Bam File Average Coverage Depth Changes After Fixmate
samtools
bash
coverage
fixmate
BAM
updated 3.1 years ago by
Pierre Lindenbaum
164k • written 3.1 years ago by
jdru
▴ 10
0
votes
0
replies
531
views
Selecting Representative Sequences from a Multiple Alignment
alignment
msa
updated 3.1 years ago by
Pierre Lindenbaum
164k • written 3.1 years ago by
jdru
▴ 10
0
votes
0
replies
2.1k
views
Comment:
Comment: Phylogenetic Tree from Massive Multifasta Alignment?
3.1 years ago by
jdru
▴ 10
2
votes
8
replies
2.1k
views
6 follow
Phylogenetic Tree from Massive Multifasta Alignment?
tree
alignment
fasta
phylogeny
3.1 years ago by
jdru
▴ 10
1
vote
1
reply
786
views
Haplogrep classify error
haplogroup
mitochondria
haplogrep
updated 14 months ago by
angelika_95
• 0 • written 3.2 years ago by
jdru
▴ 10
15 results • Page
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