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2.3k
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Using BCFtools to obtain between population Fst values from vcf file
Fst Weir and Cockerham BCFtools vcf SNP
5.1 years ago by ishengomae ▴ 110
0
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0
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7.1k
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Comment: C: Is Newbler still available for download
5.4 years ago by ishengomae ▴ 110
0
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0
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1.1k
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Comment: C: How to mine all (or most) promoter sequences from Drosophila genome
5.6 years ago by ishengomae ▴ 110
1
vote
2
replies
1.1k
views
How to mine all (or most) promoter sequences from Drosophila genome
promoter sequences Drosophila genome alignment
updated 5.6 years ago by 147k • written 5.6 years ago by ▴ 110
1
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0
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5.8k
views
Comment: C: Species tree vs Gene trees during evolutionary analyses: Does it matter?
6.7 years ago by ishengomae ▴ 110
3
votes
2
replies
6.5k
views
Identifying interactors of hub genes using Cytoscape Network Analyzer plugin
Cytoscape NetworkAnalyzer biological process
updated 7.0 years ago by 20 • written 8.6 years ago by ▴ 110
0
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0
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1.7k
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Comment: C: How to statistically test significance of molecular convergence in two unrelated
8.0 years ago by ishengomae ▴ 110
1
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2
replies
1.7k
views
How to statistically test significance of molecular convergence in two unrelated lineages
molecular convergence R statistics
updated 8.0 years ago by ★ 2.0k • written 8.0 years ago by ▴ 110
8
votes
6
replies
5.9k
views
How to programmatically query NCBI Gene database
Biopython Database R Gene NCBI
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 110
0
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3
replies
1.6k
views
Classifying proteins as enzymes, GPCRs, ion channels, etc.
RNA-Seq gene protein
updated 8.7 years ago by 7.3k • written 8.7 years ago by ▴ 110
0
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1
reply
3.5k
views
Coloring nodes using Cytoscape based on gene to pathway annotation information
Pathway Biogrid Network Cytoscape gene
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 110
0
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2
replies
4.1k
views
Methodological process for GO functional annotation of my positively selected candidate genes
gene blast
updated 9.4 years ago by 20 • written 10.6 years ago by ▴ 110
2
votes
1
reply
2.0k
views
Tools to analyze/relate protein structural information to its 3D information
gene protein 3D active site
updated 10.0 years ago by ▴ 120 • written 10.0 years ago by ▴ 110
0
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0
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5.8k
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Comment: C: Species tree vs Gene trees during evolutionary analyses: Does it matter?
10.2 years ago by ishengomae ▴ 110
4
votes
10
replies
5.8k
views
Species tree vs Gene trees during evolutionary analyses: Does it matter?
species gene evolution
updated 2.9 years ago by 44k • written 10.3 years ago by ▴ 110
1
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0
replies
5.9k
views
Comment: C: How to programmatically query NCBI Gene database
10.2 years ago by ishengomae ▴ 110
0
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0
replies
5.8k
views
Comment: C: Species tree vs Gene trees during evolutionary analyses: Does it matter?
10.2 years ago by ishengomae ▴ 110
0
votes
0
replies
5.8k
views
Comment: Comment: Species tree vs Gene trees during evolutionary analyses: Does it matter?
updated 2.9 years ago by 44k • written 10.3 years ago by ▴ 110
0
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1
reply
5.8k
views
Comment: Comment: Species tree vs Gene trees during evolutionary analyses: Does it matter?
updated 2.9 years ago by 44k • written 10.3 years ago by ▴ 110
1
vote
1
reply
1.4k
views
Dealing with sequencing errors in coding sequences
genome sequence alignment
updated 2.9 years ago by 44k • written 10.3 years ago by ▴ 110
0
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0
replies
2.2k
views
How to test for convergent/parallel evolution in a group of homologous proteins?
gene snp alignment
10.3 years ago by ishengomae ▴ 110
0
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0
replies
2.3k
views
Comment: Comment: Multiple alignment processing and Visualization tool
updated 2.9 years ago by 44k • written 10.3 years ago by ▴ 110
0
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1
reply
2.3k
views
Comment: Comment: Multiple alignment processing and Visualization tool
updated 2.9 years ago by 44k • written 10.3 years ago by ▴ 110
0
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0
replies
2.3k
views
Comment: Comment: Multiple alignment processing and Visualization tool
updated 2.9 years ago by 44k • written 10.3 years ago by ▴ 110
3
votes
4
replies
2.3k
views
Multiple alignment processing and Visualization tool
alignment
updated 2.9 years ago by 44k • written 10.3 years ago by ▴ 110
1
vote
1
reply
1.8k
views
What software to use to map and observe substitutional patterns across multiple alignments
alignment blast
updated 10.4 years ago by ▴ 400 • written 10.4 years ago by ▴ 110
0
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0
replies
2.5k
views
GO terms annotation file format to use in PANTHER
R
updated 3.2 years ago by 44k • written 10.5 years ago by ▴ 110
0
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0
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2.8k
views
Comment: C: Online blast and standalone blast return different hits?
10.4 years ago by ishengomae ▴ 110
0
votes
2
replies
2.8k
views
Online blast and standalone blast return different hits?
blast alignment
updated 3.1 years ago by 44k • written 10.4 years ago by ▴ 110
0
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0
replies
2.9k
views
Comment: C: Querying blast and getting raw hit fasta sequence
10.4 years ago by ishengomae ▴ 110
0
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2
replies
2.9k
views
Querying blast and getting raw hit fasta sequence
blast sequence alignment
updated 3.1 years ago by 44k • written 10.4 years ago by ▴ 110
0
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5
replies
2.2k
views
Where to download all known genes involved in cardiovascular, vision and nutrition physiologies?
gene genome
updated 10.5 years ago by ★ 1.9k • written 10.5 years ago by ▴ 110
0
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0
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2.2k
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Comment: C: Where to download all known genes involved in cardiovascular, vision and nutriti
10.5 years ago by ishengomae ▴ 110
0
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0
replies
2.2k
views
Comment: C: Where to download all known genes involved in cardiovascular, vision and nutriti
10.5 years ago by ishengomae ▴ 110
0
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0
replies
3.4k
views
Comment: C: Using ensembl biomart retrieving orthologous codin sequence
10.6 years ago by ishengomae ▴ 110
0
votes
3
replies
3.4k
views
Using ensembl biomart retrieving orthologous codin sequence
gene
updated 10.6 years ago by ★ 2.6k • written 10.6 years ago by ▴ 110
0
votes
0
replies
4.1k
views
Comment: C: Methodological process for GO functional annotation of my positively selected ca
10.6 years ago by ishengomae ▴ 110
0
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0
replies
2.8k
views
Comment: C: How To Remove All Sequences In My Custom Blast Database?
10.8 years ago by ishengomae ▴ 110
3
votes
2
replies
2.8k
views
How To Remove All Sequences In My Custom Blast Database?
blast database
updated 10.8 years ago by 4.1k • written 10.8 years ago by ▴ 110
1
vote
1
reply
2.1k
views
A Tool For Flagging Blast Searches?
command-line blast+
updated 10.8 years ago by ★ 4.0k • written 10.8 years ago by ▴ 110
0
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1
reply
7.1k
views
Comment: C: How To Use Pal2Nal Commandline With Python
10.9 years ago by ishengomae ▴ 110
3
votes
3
replies
7.1k
views
How To Use Pal2Nal Commandline With Python
python command-line
updated 10.9 years ago by ★ 1.7k • written 10.9 years ago by ▴ 110
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