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Which Tool is Better for Genome Polishing Using Illumina and Nanopore Reads: Polypolish vs. Pilon and Racon vs. Medaka?
medaka assembly racon polypolish pilon
updated 17 days ago by ★ 2.8k • written 17 days ago by ▴ 130
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1
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171
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Spades Genome Assembly
genome spades assembly
updated 23 days ago by ★ 2.5k • written 23 days ago by ▴ 130
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1
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481
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Answer: Answer: Tools for Reference-Guided Assembly Using Nanopore Sequencing Reads
27 days ago by Umer ▴ 130
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1
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427
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Answer: Answer: Identifying Runs of Homozygosity and Inbreeding Coefficient from VCF File
27 days ago by Umer ▴ 130
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631
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Comment: Comment: Genome Assembly Verification, Chimeric contigs
27 days ago by Umer ▴ 130
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1
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631
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Comment: Comment: Genome Assembly Verification, Chimeric contigs
28 days ago by Umer ▴ 130
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631
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Comment: Comment: Genome Assembly Verification, Chimeric contigs
28 days ago by Umer ▴ 130
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631
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Comment: Comment: Genome Assembly Verification, Chimeric contigs
29 days ago by Umer ▴ 130
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1
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631
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Comment: Comment: Genome Assembly Verification, Chimeric contigs
29 days ago by Umer ▴ 130
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10
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631
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Genome Assembly Verification, Chimeric contigs
flye genome assembly fungus
updated 27 days ago by ▴ 470 • written 29 days ago by ▴ 130
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369
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Comment: Comment: Genome Polishing nextPolish
6 weeks ago by Umer ▴ 130
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2
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369
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Genome Polishing nextPolish
nextpolish2 nextpolish pilon racon
6 weeks ago by Umer ▴ 130
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535
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Comment: Comment: Genome Assembly Sorting
6 weeks ago by Umer ▴ 130
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1
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535
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Comment: Comment: Genome Assembly Sorting
6 weeks ago by Umer ▴ 130
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6
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535
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Genome Assembly Sorting
genome assembly sorting
updated 6 weeks ago by 147k • written 6 weeks ago by ▴ 130
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544
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Comment: Comment: Genome Assembly Workflow assessment
8 weeks ago by Umer ▴ 130
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2
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544
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Comment: Comment: Genome Assembly Workflow assessment
8 weeks ago by Umer ▴ 130
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0
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544
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Comment: Comment: Genome Assembly Workflow assessment
8 weeks ago by Umer ▴ 130
5
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7
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544
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Genome Assembly Workflow assessment
flye genome-assembly pilon racon
8 weeks ago by Umer ▴ 130
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0
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885
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Comment: Comment: Canu genome assembly output
10 weeks ago by Umer ▴ 130
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1
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885
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Comment: Comment: Canu genome assembly output
10 weeks ago by Umer ▴ 130
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1
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885
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Comment: Comment: Canu genome assembly output
10 weeks ago by Umer ▴ 130
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1
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885
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Comment: Comment: Canu genome assembly output
11 weeks ago by Umer ▴ 130
2
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1
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270
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Canu Output Explanation
fungi canu genome assembly
updated 12 weeks ago by 13k • written 12 weeks ago by ▴ 130
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8
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885
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Canu genome assembly output
flye assembly fusarium canu fungus
10 weeks ago by Umer ▴ 130
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363
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Comment: Comment: Canu Nanopore Genome assembly optimization
3 months ago by Umer ▴ 130
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3
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363
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Canu Nanopore Genome assembly optimization
slurm assembly genome canu nanopore
updated 3 months ago by ★ 1.9k • written 3 months ago by ▴ 130
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500
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Comment: Comment: Nanopore Data Quality Check
3 months ago by Umer ▴ 130
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1
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500
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Comment: Comment: Nanopore Data Quality Check
3 months ago by Umer ▴ 130
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5
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500
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Nanopore Data Quality Check
QC Fungi genome-assembly Nanopore
3 months ago by Umer ▴ 130
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0
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855
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Comment: Comment: SPADES Result Comparison
4 months ago by Umer ▴ 130
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6
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855
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SPADES Result Comparison
illumina genome SPAdes assembly
4 months ago by Umer ▴ 130
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1
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677
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Comment: Comment: Out of Sequencer Nanopore Raw Data
4 months ago by Umer ▴ 130
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0
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677
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Comment: Comment: Out of Sequencer Nanopore Raw Data
4 months ago by Umer ▴ 130
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2
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677
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Comment: Comment: Out of Sequencer Nanopore Raw Data
4 months ago by Umer ▴ 130
2
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8
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677
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Out of Sequencer Nanopore Raw Data
fastq assembly fast5 genome nanopore
updated 4 months ago by 147k • written 4 months ago by ▴ 130
5
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8
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847
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6 follow
How to use Anaconda/Miniconda more effectively ?
anaconda miniconda
updated 4 months ago by ▴ 990 • written 4 months ago by ▴ 130
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1
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855
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Comment: Comment: SPADES Result Comparison
5 months ago by Umer ▴ 130
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0
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636
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Comment: Comment: Warning in Denovo Genome Assembly via SPADes
5 months ago by Umer ▴ 130
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1
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636
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Comment: Comment: Warning in Denovo Genome Assembly via SPADes
5 months ago by Umer ▴ 130
2
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5
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636
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Warning in Denovo Genome Assembly via SPADes
Assembly SPAdes fungi Illumina
updated 5 months ago by 21k • written 5 months ago by ▴ 130
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1
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261
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Error in "Per Tile Sequence Quality"
Illumina NOvaSeqx genome-assembly FastQC
updated 5 months ago by 44k • written 5 months ago by ▴ 130
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0
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658
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Comment: Comment: Illumina Raw Data Multiple Read FIles Discussion
5 months ago by Umer ▴ 130
2
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1
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641
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Answer: Answer: Overrepresented sequence in reverse read
5 months ago by Umer ▴ 130
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1
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658
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Comment: Comment: Illumina Raw Data Multiple Read FIles Discussion
5 months ago by Umer ▴ 130
0
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1
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658
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Comment: Comment: Illumina Raw Data Multiple Read FIles Discussion
5 months ago by Umer ▴ 130
6
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7
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658
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Illumina Raw Data Multiple Read FIles Discussion
novaseqX pairedend illumina fungus
5 months ago by Umer ▴ 130
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0
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295
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Comment: Comment: Sequece Raw Data QC A/T.G.C Distribution
5 months ago by Umer ▴ 130
1
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2
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295
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Sequece Raw Data QC A/T.G.C Distribution
illumina sequencing FastQC
updated 5 months ago by 147k • written 5 months ago by ▴ 130
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1
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1.1k
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Comment: Comment: Best practices in Fungal Genome Assembly
5 months ago by Umer ▴ 130
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