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680
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Comment: Comment: OMA use case
8 days ago by Adrian Altenhoff ★ 1.1k
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0
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680
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Comment: Comment: OMA use case
13 days ago by Adrian Altenhoff ★ 1.1k
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2
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680
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Comment: Comment: OMA use case
13 days ago by Adrian Altenhoff ★ 1.1k
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3
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680
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Answer: Answer: OMA use case
13 days ago by Adrian Altenhoff ★ 1.1k
1
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0
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978
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Answer: Answer: Is it possible to get the percentage identity between a pair of orthologs at the
3 months ago by Adrian Altenhoff ★ 1.1k
2
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0
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1.0k
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Comment: Comment: Best Approach to Identify Human-C. elegans Orthologs?
3 months ago by Adrian Altenhoff ★ 1.1k
1
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1
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557
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Answer: Answer: Converting OMA IDs to Ensembl gene names
8 months ago by Adrian Altenhoff ★ 1.1k
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0
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388
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Answer: Answer: Obtaining OMA and HOG IDs
9 months ago by Adrian Altenhoff ★ 1.1k
2
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0
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476
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Answer: Answer: Finding orthologs between genome error
11 months ago by Adrian Altenhoff ★ 1.1k
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0
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446
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Answer: Answer: Mapping of OMA IDs to UniProtKB AC
11 months ago by Adrian Altenhoff ★ 1.1k
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0
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1.5k
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Comment: Comment: OMA in AWS cloud
17 months ago by Adrian Altenhoff ★ 1.1k
2
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0
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1.5k
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Answer: Answer: OMA in AWS cloud
18 months ago by Adrian Altenhoff ★ 1.1k
1
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0
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769
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Answer: Answer: Downloading Microsyntenic Fasta Sequences with Varying Chromosome Formats
20 months ago by Adrian Altenhoff ★ 1.1k
1
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3
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1.6k
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Answer: Answer: syntax errors when running part3 all-against-all
2.0 years ago by Adrian Altenhoff ★ 1.1k
1
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0
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1.0k
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Answer: Answer: Obtaining every"Protein ID" from a genome in OMA
2.2 years ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
648
views
Answer: Answer: Error, (in LoadSpliceMap) string to parse is too long
2.2 years ago by Adrian Altenhoff ★ 1.1k
1
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0
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967
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Answer: Answer: OMA standalone error during database conversion step: Matches between X/X have b
2.3 years ago by Adrian Altenhoff ★ 1.1k
0
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0
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688
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Answer: Answer: To generate genome-wise orthologs including paralogs from OMA
2.3 years ago by Adrian Altenhoff ★ 1.1k
1
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0
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877
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Answer: Answer: Orthologs distances in OMA
2.9 years ago by Adrian Altenhoff ★ 1.1k
2
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0
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679
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Answer: Answer: Multiple OMA groups per uniprotID in OMAdb
2.9 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.7k
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Comment: Comment: HOG without numbering in the genome of the ancestor reconstructed using the pyHA
3.1 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.7k
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Comment: Comment: HOG without numbering in the genome of the ancestor reconstructed using the pyHA
3.1 years ago by Adrian Altenhoff ★ 1.1k
0
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0
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756
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Answer: Answer: Error while running All-against-All alignments in OMA
3.1 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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3.5k
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Comment: Comment: Making python script for downloading genomes for OMA Analysis
3.3 years ago by Adrian Altenhoff ★ 1.1k
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0
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904
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Answer: Answer: OMA speed
3.3 years ago by Adrian Altenhoff ★ 1.1k
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0
replies
860
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Answer: Answer: OMA standalone "FileStat" error
3.3 years ago by Adrian Altenhoff ★ 1.1k
1
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0
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1.1k
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Answer: Answer: OMA Internet connection error - SLURM
3.4 years ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
942
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Answer: A: oma-cleanup cannot be executed
4.1 years ago by Adrian Altenhoff ★ 1.1k
3
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1
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1.3k
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Answer: A: OMA standalone, parallelization
4.1 years ago by Adrian Altenhoff ★ 1.1k
1
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0
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1.2k
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Comment: C: Problem running OMA standalone
4.2 years ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
1.5k
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Comment: C: OMA-standalone and sequence gaps
4.2 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.5k
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Answer: A: OMA-standalone and sequence gaps
4.2 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.4k
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Comment: C: OMA Standalone 2.4.2: cannot write to .oma directory
4.2 years ago by Adrian Altenhoff ★ 1.1k
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0
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2.1k
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Comment: C: OMA Phase 2 stuck in "reading all vs. all" stage for 24 hours
4.2 years ago by Adrian Altenhoff ★ 1.1k
1
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0
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1.4k
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Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
4.3 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.4k
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Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
4.3 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.4k
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Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
4.3 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.4k
views
Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
4.3 years ago by Adrian Altenhoff ★ 1.1k
4
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2
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2.0k
views
Answer: A: Error running OMA standalone at HOG computation step
4.3 years ago by Adrian Altenhoff ★ 1.1k
2
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1
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2.0k
views
Comment: C: Error running OMA standalone at HOG computation step
4.3 years ago by Adrian Altenhoff ★ 1.1k
2
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1
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2.0k
views
Answer: A: Error running OMA standalone at HOG computation step
updated 4.3 years ago by 150k • written 4.3 years ago by ★ 1.1k
1
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0
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1.6k
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Comment: C: Predicting Gene Ontology function in OMA for large datasets
4.4 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.6k
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Comment: C: Predicting Gene Ontology function in OMA for large datasets
4.4 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.6k
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Comment: C: Predicting Gene Ontology function in OMA for large datasets
4.4 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.6k
views
Answer: A: Predicting Gene Ontology function in OMA for large datasets
4.4 years ago by Adrian Altenhoff ★ 1.1k
3
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1
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1.0k
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Answer: A: OMA standalone estimating memory use for bacterial genomes
4.5 years ago by Adrian Altenhoff ★ 1.1k
0
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0
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1.2k
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Answer: A: Alignment scores thresholds with DNA
4.6 years ago by Adrian Altenhoff ★ 1.1k
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0
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1.2k
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Comment: C: oma -c error report
4.7 years ago by Adrian Altenhoff ★ 1.1k
0
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0
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1.1k
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Answer: A: can standalone OMA be used on protein fasta (not genome)
4.8 years ago by Adrian Altenhoff ★ 1.1k
0
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0
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1.1k
views
Answer: A: Clusters proteins at each taxonomic rank - OMA
4.9 years ago by Adrian Altenhoff ★ 1.1k
132 results • Page 1 of 3
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