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332
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Answer: Answer: Converting OMA IDs to Ensembl gene names
3 months ago by Adrian Altenhoff ★ 1.1k
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0
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267
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Answer: Answer: Obtaining OMA and HOG IDs
5 months ago by Adrian Altenhoff ★ 1.1k
2
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0
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378
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Answer: Answer: Finding orthologs between genome error
7 months ago by Adrian Altenhoff ★ 1.1k
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0
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346
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Answer: Answer: Mapping of OMA IDs to UniProtKB AC
7 months ago by Adrian Altenhoff ★ 1.1k
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0
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1.3k
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Comment: Comment: OMA in AWS cloud
13 months ago by Adrian Altenhoff ★ 1.1k
2
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0
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1.3k
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Answer: Answer: OMA in AWS cloud
14 months ago by Adrian Altenhoff ★ 1.1k
1
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0
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634
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Answer: Answer: Downloading Microsyntenic Fasta Sequences with Varying Chromosome Formats
15 months ago by Adrian Altenhoff ★ 1.1k
1
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3
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1.4k
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Answer: Answer: syntax errors when running part3 all-against-all
20 months ago by Adrian Altenhoff ★ 1.1k
1
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0
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898
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Answer: Answer: Obtaining every"Protein ID" from a genome in OMA
21 months ago by Adrian Altenhoff ★ 1.1k
1
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0
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549
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Answer: Answer: Error, (in LoadSpliceMap) string to parse is too long
21 months ago by Adrian Altenhoff ★ 1.1k
1
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0
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848
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Answer: Answer: OMA standalone error during database conversion step: Matches between X/X have b
23 months ago by Adrian Altenhoff ★ 1.1k
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0
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586
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Answer: Answer: To generate genome-wise orthologs including paralogs from OMA
23 months ago by Adrian Altenhoff ★ 1.1k
1
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0
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774
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Answer: Answer: Orthologs distances in OMA
2.5 years ago by Adrian Altenhoff ★ 1.1k
2
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0
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598
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Answer: Answer: Multiple OMA groups per uniprotID in OMAdb
2.6 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.5k
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Comment: Comment: HOG without numbering in the genome of the ancestor reconstructed using the pyHA
2.7 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.5k
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Comment: Comment: HOG without numbering in the genome of the ancestor reconstructed using the pyHA
2.7 years ago by Adrian Altenhoff ★ 1.1k
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0
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681
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Answer: Answer: Error while running All-against-All alignments in OMA
2.8 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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3.1k
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Comment: Comment: Making python script for downloading genomes for OMA Analysis
2.9 years ago by Adrian Altenhoff ★ 1.1k
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0
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806
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Answer: Answer: OMA speed
3.0 years ago by Adrian Altenhoff ★ 1.1k
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0
replies
782
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Answer: Answer: OMA standalone "FileStat" error
3.0 years ago by Adrian Altenhoff ★ 1.1k
1
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0
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961
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Answer: Answer: OMA Internet connection error - SLURM
3.0 years ago by Adrian Altenhoff ★ 1.1k
1
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0
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805
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Answer: A: oma-cleanup cannot be executed
3.7 years ago by Adrian Altenhoff ★ 1.1k
3
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1
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1.2k
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Answer: A: OMA standalone, parallelization
3.7 years ago by Adrian Altenhoff ★ 1.1k
1
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0
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1.1k
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Comment: C: Problem running OMA standalone
3.8 years ago by Adrian Altenhoff ★ 1.1k
1
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0
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1.4k
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Comment: C: OMA-standalone and sequence gaps
3.8 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.4k
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Answer: A: OMA-standalone and sequence gaps
3.8 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.2k
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Comment: C: OMA Standalone 2.4.2: cannot write to .oma directory
3.8 years ago by Adrian Altenhoff ★ 1.1k
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0
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1.9k
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Comment: C: OMA Phase 2 stuck in "reading all vs. all" stage for 24 hours
3.9 years ago by Adrian Altenhoff ★ 1.1k
1
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0
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1.2k
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Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
3.9 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.2k
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Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
3.9 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.2k
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Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
3.9 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.2k
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Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
3.9 years ago by Adrian Altenhoff ★ 1.1k
4
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2
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1.8k
views
Answer: A: Error running OMA standalone at HOG computation step
4.0 years ago by Adrian Altenhoff ★ 1.1k
2
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1
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1.8k
views
Comment: C: Error running OMA standalone at HOG computation step
4.0 years ago by Adrian Altenhoff ★ 1.1k
2
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1
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1.8k
views
Answer: A: Error running OMA standalone at HOG computation step
updated 4.0 years ago by 147k • written 4.0 years ago by ★ 1.1k
1
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0
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1.4k
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Comment: C: Predicting Gene Ontology function in OMA for large datasets
4.0 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.4k
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Comment: C: Predicting Gene Ontology function in OMA for large datasets
4.0 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.4k
views
Comment: C: Predicting Gene Ontology function in OMA for large datasets
4.0 years ago by Adrian Altenhoff ★ 1.1k
1
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1
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1.4k
views
Answer: A: Predicting Gene Ontology function in OMA for large datasets
4.0 years ago by Adrian Altenhoff ★ 1.1k
3
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1
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949
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Answer: A: OMA standalone estimating memory use for bacterial genomes
4.2 years ago by Adrian Altenhoff ★ 1.1k
0
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0
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1.1k
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Answer: A: Alignment scores thresholds with DNA
4.3 years ago by Adrian Altenhoff ★ 1.1k
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0
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1.1k
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Comment: C: oma -c error report
4.3 years ago by Adrian Altenhoff ★ 1.1k
0
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0
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997
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Answer: A: can standalone OMA be used on protein fasta (not genome)
4.5 years ago by Adrian Altenhoff ★ 1.1k
0
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0
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979
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Answer: A: Clusters proteins at each taxonomic rank - OMA
4.5 years ago by Adrian Altenhoff ★ 1.1k
1
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0
replies
860
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Answer: A: Error, 'sequence 1 is too long' OMA Standalone
4.6 years ago by Adrian Altenhoff ★ 1.1k
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0
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2.2k
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Comment: C: OMA not finding numpy; pip and wget failing
4.8 years ago by Adrian Altenhoff ★ 1.1k
1
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2
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2.2k
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Comment: C: OMA not finding numpy; pip and wget failing
4.9 years ago by Adrian Altenhoff ★ 1.1k
2
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1
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1.8k
views
Answer: A: OMA error in stage 2 of 2 stage process
updated 4.9 years ago by 44k • written 8.9 years ago by ★ 1.1k
4
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1
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2.0k
views
Answer: A: What exactly is OMA doing here ?
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 1.1k
0
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0
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2.2k
views
Answer: A: oma stack size error
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 1.1k
126 results • Page 1 of 3
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