Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
1
reply
336
views
Answer: Answer: Converting OMA IDs to Ensembl gene names
3 months ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
271
views
Answer: Answer: Obtaining OMA and HOG IDs
5 months ago by Adrian Altenhoff ★ 1.1k
2
votes
0
replies
383
views
Answer: Answer: Finding orthologs between genome error
7 months ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
351
views
Answer: Answer: Mapping of OMA IDs to UniProtKB AC
7 months ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
1.3k
views
Comment: Comment: OMA in AWS cloud
13 months ago by Adrian Altenhoff ★ 1.1k
2
votes
0
replies
1.3k
views
Answer: Answer: OMA in AWS cloud
14 months ago by Adrian Altenhoff ★ 1.1k
1
vote
0
replies
638
views
Answer: Answer: Downloading Microsyntenic Fasta Sequences with Varying Chromosome Formats
15 months ago by Adrian Altenhoff ★ 1.1k
1
vote
3
replies
1.4k
views
Answer: Answer: syntax errors when running part3 all-against-all
20 months ago by Adrian Altenhoff ★ 1.1k
1
vote
0
replies
901
views
Answer: Answer: Obtaining every"Protein ID" from a genome in OMA
22 months ago by Adrian Altenhoff ★ 1.1k
1
vote
0
replies
551
views
Answer: Answer: Error, (in LoadSpliceMap) string to parse is too long
22 months ago by Adrian Altenhoff ★ 1.1k
1
vote
0
replies
850
views
Answer: Answer: OMA standalone error during database conversion step: Matches between X/X have b
23 months ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
588
views
Answer: Answer: To generate genome-wise orthologs including paralogs from OMA
24 months ago by Adrian Altenhoff ★ 1.1k
1
vote
0
replies
776
views
Answer: Answer: Orthologs distances in OMA
2.5 years ago by Adrian Altenhoff ★ 1.1k
2
votes
0
replies
600
views
Answer: Answer: Multiple OMA groups per uniprotID in OMAdb
2.6 years ago by Adrian Altenhoff ★ 1.1k
1
vote
1
reply
1.5k
views
Comment: Comment: HOG without numbering in the genome of the ancestor reconstructed using the pyHA
2.7 years ago by Adrian Altenhoff ★ 1.1k
1
vote
1
reply
1.5k
views
Comment: Comment: HOG without numbering in the genome of the ancestor reconstructed using the pyHA
2.7 years ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
682
views
Answer: Answer: Error while running All-against-All alignments in OMA
2.8 years ago by Adrian Altenhoff ★ 1.1k
1
vote
1
reply
3.1k
views
Comment: Comment: Making python script for downloading genomes for OMA Analysis
2.9 years ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
809
views
Answer: Answer: OMA speed
3.0 years ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
786
views
Answer: Answer: OMA standalone "FileStat" error
3.0 years ago by Adrian Altenhoff ★ 1.1k
1
vote
0
replies
965
views
Answer: Answer: OMA Internet connection error - SLURM
3.0 years ago by Adrian Altenhoff ★ 1.1k
1
vote
0
replies
808
views
Answer: A: oma-cleanup cannot be executed
3.7 years ago by Adrian Altenhoff ★ 1.1k
3
votes
1
reply
1.2k
views
Answer: A: OMA standalone, parallelization
3.7 years ago by Adrian Altenhoff ★ 1.1k
1
vote
0
replies
1.1k
views
Comment: C: Problem running OMA standalone
3.8 years ago by Adrian Altenhoff ★ 1.1k
1
vote
0
replies
1.4k
views
Comment: C: OMA-standalone and sequence gaps
3.8 years ago by Adrian Altenhoff ★ 1.1k
1
vote
1
reply
1.4k
views
Answer: A: OMA-standalone and sequence gaps
3.8 years ago by Adrian Altenhoff ★ 1.1k
1
vote
1
reply
1.2k
views
Comment: C: OMA Standalone 2.4.2: cannot write to .oma directory
3.9 years ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
1.9k
views
Comment: C: OMA Phase 2 stuck in "reading all vs. all" stage for 24 hours
3.9 years ago by Adrian Altenhoff ★ 1.1k
1
vote
0
replies
1.2k
views
Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
4.0 years ago by Adrian Altenhoff ★ 1.1k
1
vote
1
reply
1.2k
views
Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
4.0 years ago by Adrian Altenhoff ★ 1.1k
1
vote
1
reply
1.2k
views
Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
4.0 years ago by Adrian Altenhoff ★ 1.1k
1
vote
1
reply
1.2k
views
Comment: C: Downloading all-against-all precomputed for any number of species returns 504 Ga
4.0 years ago by Adrian Altenhoff ★ 1.1k
4
votes
2
replies
1.8k
views
Answer: A: Error running OMA standalone at HOG computation step
4.0 years ago by Adrian Altenhoff ★ 1.1k
2
votes
1
reply
1.8k
views
Comment: C: Error running OMA standalone at HOG computation step
4.0 years ago by Adrian Altenhoff ★ 1.1k
2
votes
1
reply
1.8k
views
Answer: A: Error running OMA standalone at HOG computation step
updated 4.0 years ago by 147k • written 4.0 years ago by ★ 1.1k
1
vote
0
replies
1.4k
views
Comment: C: Predicting Gene Ontology function in OMA for large datasets
4.0 years ago by Adrian Altenhoff ★ 1.1k
1
vote
1
reply
1.4k
views
Comment: C: Predicting Gene Ontology function in OMA for large datasets
4.0 years ago by Adrian Altenhoff ★ 1.1k
1
vote
1
reply
1.4k
views
Comment: C: Predicting Gene Ontology function in OMA for large datasets
4.0 years ago by Adrian Altenhoff ★ 1.1k
1
vote
1
reply
1.4k
views
Answer: A: Predicting Gene Ontology function in OMA for large datasets
4.0 years ago by Adrian Altenhoff ★ 1.1k
3
votes
1
reply
950
views
Answer: A: OMA standalone estimating memory use for bacterial genomes
4.2 years ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
1.1k
views
Answer: A: Alignment scores thresholds with DNA
4.3 years ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
1.1k
views
Comment: C: oma -c error report
4.4 years ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
999
views
Answer: A: can standalone OMA be used on protein fasta (not genome)
4.5 years ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
983
views
Answer: A: Clusters proteins at each taxonomic rank - OMA
4.6 years ago by Adrian Altenhoff ★ 1.1k
1
vote
0
replies
865
views
Answer: A: Error, 'sequence 1 is too long' OMA Standalone
4.6 years ago by Adrian Altenhoff ★ 1.1k
0
votes
0
replies
2.2k
views
Comment: C: OMA not finding numpy; pip and wget failing
4.8 years ago by Adrian Altenhoff ★ 1.1k
1
vote
2
replies
2.2k
views
Comment: C: OMA not finding numpy; pip and wget failing
4.9 years ago by Adrian Altenhoff ★ 1.1k
2
votes
1
reply
1.8k
views
Answer: A: OMA error in stage 2 of 2 stage process
updated 5.0 years ago by 44k • written 8.9 years ago by ★ 1.1k
4
votes
1
reply
2.0k
views
Answer: A: What exactly is OMA doing here ?
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 1.1k
0
votes
0
replies
2.2k
views
Answer: A: oma stack size error
updated 5.0 years ago by 44k • written 9.0 years ago by ★ 1.1k
126 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6