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Comment: Comment: ESTIMATE tumor purity
2.4 years ago by JACKY ▴ 160
0
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1
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596
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From counts to TPM code verification
TPM normalization r
updated 2.5 years ago by 85k • written 2.5 years ago by ▴ 160
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1
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1.5k
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Comment: Comment: A check over my code using Limma DE, starting from normalized data
2.5 years ago by JACKY ▴ 160
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0
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1.5k
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Comment: Comment: A check over my code using Limma DE, starting from normalized data
2.5 years ago by JACKY ▴ 160
0
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2
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1.5k
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Comment: Comment: A check over my code using Limma DE, starting from normalized data
2.5 years ago by JACKY ▴ 160
0
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7
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1.5k
views
A check over my code using Limma DE, starting from normalized data
limma r
updated 2.1 years ago by ★ 7.6k • written 2.5 years ago by ▴ 160
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1
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1.3k
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Comment: Comment: Cellular deconvolution does not work without batch effect correction
2.7 years ago by JACKY ▴ 160
1
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4
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1.3k
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Cellular deconvolution does not work without batch effect correction
deconvolution batch-effect r
updated 3 months ago by 44k • written 2.7 years ago by ▴ 160
0
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1
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1.2k
views
Comment: Comment: Error: Application depends on package "rlang" but it is not installed
2.7 years ago by JACKY ▴ 160
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3
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1.2k
views
Error: Application depends on package "rlang" but it is not installed
shiny R
updated 2.7 years ago by 27k • written 2.7 years ago by ▴ 160
0
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0
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411
views
How to check if genes are important in cancer, using depmap or cBioPortal?
cBioPortal r depmap
2.7 years ago by JACKY ▴ 160
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0
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654
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Comment: Comment: associate EBV to cancer
2.7 years ago by JACKY ▴ 160
0
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0
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869
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Comment: Comment: low counts in DESeq2
2.7 years ago by JACKY ▴ 160
0
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2
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654
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associate EBV to cancer
EBV r depmap
2.7 years ago by JACKY ▴ 160
0
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2
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869
views
low counts in DESeq2
DESeq2 r
2.7 years ago by JACKY ▴ 160
0
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1
reply
1.0k
views
Comment: Comment: How to deal with batch effects of multiple datasets?
2.7 years ago by JACKY ▴ 160
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1
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1.0k
views
Comment: Comment: How to deal with batch effects of multiple datasets?
2.7 years ago by JACKY ▴ 160
0
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5
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1.0k
views
How to deal with batch effects of multiple datasets?
DESeq2 r
updated 2.7 years ago by 14k • written 2.7 years ago by ▴ 160
0
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0
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367
views
Primary and Metastatic genes
cancer DESeq2
2.7 years ago by JACKY ▴ 160
1
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7
replies
2.2k
views
Linear regression on RNA-seq data
r regression
2.7 years ago by JACKY ▴ 160
0
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0
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2.2k
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Comment: Comment: Linear regression on RNA-seq data
2.7 years ago by JACKY ▴ 160
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0
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2.2k
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Comment: Comment: Linear regression on RNA-seq data
2.7 years ago by JACKY ▴ 160
0
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0
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2.2k
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Comment: Comment: Linear regression on RNA-seq data
2.7 years ago by JACKY ▴ 160
0
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0
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441
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Contrast for LIMMA
r limma
2.7 years ago by JACKY ▴ 160
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0
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5.0k
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Comment: Comment: limma - voom with TPM data
2.8 years ago by JACKY ▴ 160
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1
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5.0k
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Comment: Comment: limma - voom with TPM data
2.8 years ago by JACKY ▴ 160
0
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1
reply
5.0k
views
Comment: Comment: limma - voom with TPM data
2.8 years ago by JACKY ▴ 160
1
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1
reply
5.0k
views
Comment: Comment: limma - voom with TPM data
2.8 years ago by JACKY ▴ 160
3
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8
replies
5.0k
views
limma - voom with TPM data
r limma
2.8 years ago by JACKY ▴ 160
0
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1
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2.9k
views
Comment: Comment: DESeq2 shrinking log fold-change
2.8 years ago by JACKY ▴ 160
0
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1
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2.9k
views
Comment: Comment: DESeq2 shrinking log fold-change
2.8 years ago by JACKY ▴ 160
0
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5
replies
2.9k
views
DESeq2 shrinking log fold-change
DESeq2 r
updated 2.8 years ago by ★ 2.6k • written 2.8 years ago by ▴ 160
3
votes
4
replies
2.4k
views
heatmaps for limma-voom DE genes
heatmap r limma
updated 2.8 years ago by 85k • written 2.8 years ago by ▴ 160
0
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1
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2.4k
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Comment: Comment: heatmaps for limma-voom DE genes
2.8 years ago by JACKY ▴ 160
0
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0
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353
views
t-SNE for multiple datasets in R
t-sne r
2.8 years ago by JACKY ▴ 160
0
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0
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1.7k
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Comment: Comment: How to get gene lengths ?
2.8 years ago by JACKY ▴ 160
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2
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1.7k
views
How to get gene lengths ?
tpm r RNA-seq
2.8 years ago by JACKY ▴ 160
0
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1
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2.9k
views
How to read a tar file, filled with txt.gz files and CEL.gz
tar R 7-Zip
updated 2.9 years ago by 85k • written 2.9 years ago by ▴ 160
2
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1
reply
924
views
How do I download data from the EGA ?
data dataset EGA. r
updated 2.9 years ago by 147k • written 2.9 years ago by ▴ 160
0
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2
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1.4k
views
Error in read.table(file = file, header = header, sep = sep, quote = quote, : duplicate 'row.names' are not allowed
URL R
updated 18 months ago by 44k • written 3.1 years ago by ▴ 160
140 results • Page 3 of 3
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