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Comment: C: Forcing A1/A2 alleles in PLINK in a VCF phased file
7.4 years ago by GabrielMontenegro ▴ 680
1
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0
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7.6k
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Comment: C: Kinship Relatedness using plink
7.4 years ago by GabrielMontenegro ▴ 680
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7.6k
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Answer: Answer: Kinship Relatedness using plink
7.4 years ago by GabrielMontenegro ▴ 680
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0
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5.5k
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Comment: C: 1000 genomes PCA for whole genome
7.4 years ago by GabrielMontenegro ▴ 680
0
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1
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2.1k
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How to estimate significance of RPKM value on GTEX
rna-seq gene expression
updated 7.5 years ago by 20 • written 7.5 years ago by ▴ 680
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1
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3.2k
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Estimating heritability using GCTA or LDAK in an admixed population
GCTA admixture heritability
updated 7.5 years ago by ▴ 110 • written 8.3 years ago by ▴ 680
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2.1k
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Comment: C: How to estimate significance of RPKM value on GTEX
7.5 years ago by GabrielMontenegro ▴ 680
0
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2
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3.2k
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Comment: C: Plink genotype data (based on SNP) format!
7.5 years ago by GabrielMontenegro ▴ 680
2
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1
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5.2k
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Answer: A: Calculating ethnicity of a sample VCF
7.5 years ago by GabrielMontenegro ▴ 680
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1
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2.5k
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Answer: A: Is it possible to use haplotypes instead of SNPs for association testing with ph
7.5 years ago by GabrielMontenegro ▴ 680
2
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0
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2.1k
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Comment: C: Deciding on a hardy-weinberg filter for case-only dataset
7.6 years ago by GabrielMontenegro ▴ 680
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0
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1.7k
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Answer: A: how to GWAS of characters with normal distribution?
7.6 years ago by GabrielMontenegro ▴ 680
1
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5
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4.5k
views
Meta-analysis in PLINK - What to use in order to do a forest plot
meta-analysis plink beta
updated 7.6 years ago by • 0 • written 8.0 years ago by ▴ 680
3
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1
reply
2.1k
views
Meaning of "EX_TARGET" in VCF files 1000 genomes
genome vcf
updated 7.7 years ago by 165k • written 7.7 years ago by ▴ 680
0
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1
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1.9k
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Getting Precomputed Conservation Scores
SNP genome conservation
updated 7.8 years ago by 5.8k • written 7.8 years ago by ▴ 680
10
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10
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3.3k
views
Good books to learn probability distributions
books statistics
updated 7.8 years ago by 55k • written 7.8 years ago by ▴ 680
0
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0
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3.3k
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Comment: C: Good books to learn probability distributions
7.8 years ago by GabrielMontenegro ▴ 680
0
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0
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3.3k
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Comment: C: Good books to learn probability distributions
7.8 years ago by GabrielMontenegro ▴ 680
0
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1
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3.3k
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Comment: C: Good books to learn probability distributions
7.8 years ago by GabrielMontenegro ▴ 680
0
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1
reply
3.3k
views
Comment: C: Good books to learn probability distributions
7.8 years ago by GabrielMontenegro ▴ 680
0
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0
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3.3k
views
Comment: C: Good books to learn probability distributions
7.8 years ago by GabrielMontenegro ▴ 680
0
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0
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1.8k
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Comment: C: Power of ADMXITURE mapping
7.8 years ago by GabrielMontenegro ▴ 680
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2
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1.8k
views
Power of ADMXITURE mapping
admixture gwas power
updated 7.8 years ago by ★ 2.8k • written 8.0 years ago by ▴ 680
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0
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4.7k
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Comment: C: How to get IDs of family trios in 1000 genomes project?
7.9 years ago by GabrielMontenegro ▴ 680
0
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1
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4.7k
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Comment: C: How to get IDs of family trios in 1000 genomes project?
7.9 years ago by GabrielMontenegro ▴ 680
3
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6
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4.7k
views
How to get IDs of family trios in 1000 genomes project?
genome
updated 7.9 years ago by ★ 2.8k • written 7.9 years ago by ▴ 680
0
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0
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4.7k
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Comment: C: How to get IDs of family trios in 1000 genomes project?
7.9 years ago by GabrielMontenegro ▴ 680
1
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1
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4.2k
views
Comment: C: Inconsistency in VCF and Plink format after conversion
7.9 years ago by GabrielMontenegro ▴ 680
0
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1
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4.2k
views
Comment: C: Inconsistency in VCF and Plink format after conversion
7.9 years ago by GabrielMontenegro ▴ 680
1
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1
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4.2k
views
Comment: C: Inconsistency in VCF and Plink format after conversion
7.9 years ago by GabrielMontenegro ▴ 680
0
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1
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10k
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Comment: C: pca in eigenstrat
7.9 years ago by GabrielMontenegro ▴ 680
1
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1
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10k
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Comment: C: pca in eigenstrat
7.9 years ago by GabrielMontenegro ▴ 680
2
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1
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2.8k
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Comment: C: Meta-analysis: How to join data from different platforms
7.9 years ago by GabrielMontenegro ▴ 680
1
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1
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10k
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Answer: A: pca in eigenstrat
7.9 years ago by GabrielMontenegro ▴ 680
0
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0
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4.5k
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Comment: C: Identify overlapping SNPs
7.9 years ago by GabrielMontenegro ▴ 680
0
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1
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4.5k
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Comment: C: Identify overlapping SNPs
7.9 years ago by GabrielMontenegro ▴ 680
0
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0
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1.5k
views
Gutenkunst model (2009) in ms or msms
genome ms msms simulation
7.9 years ago by GabrielMontenegro ▴ 680
0
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1
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4.5k
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Comment: C: Identify overlapping SNPs
7.9 years ago by GabrielMontenegro ▴ 680
0
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1
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4.5k
views
Answer: A: Identify overlapping SNPs
7.9 years ago by GabrielMontenegro ▴ 680
0
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0
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4.4k
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Comment: C: How to convert input files from PLINK to snp.plotter?
7.9 years ago by GabrielMontenegro ▴ 680
0
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0
replies
5.2k
views
Answer: A: Theta Watterson on SNP
7.9 years ago by GabrielMontenegro ▴ 680
1
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1
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4.4k
views
Comment: C: How to convert input files from PLINK to snp.plotter?
7.9 years ago by GabrielMontenegro ▴ 680
0
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1
reply
5.7k
views
VCFtools: --window-pi and --from-bp --to-bp produces different start and ending windows
vcf SNP genome
7.9 years ago by GabrielMontenegro ▴ 680
1
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1
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4.4k
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Answer: A: How to convert input files from PLINK to snp.plotter?
7.9 years ago by GabrielMontenegro ▴ 680
3
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0
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6.6k
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Answer: A: How to add trio information to VCF or PED format (to compute Mendel error in Pli
7.9 years ago by GabrielMontenegro ▴ 680
5
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1
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4.5k
views
Understanding standardized genotype matrix
SNP genome
updated 7.9 years ago by ★ 2.0k • written 8.0 years ago by ▴ 680
0
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0
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5.3k
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Comment: C: Convert numeric alleles into letters
8.0 years ago by GabrielMontenegro ▴ 680
0
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1
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1.4k
views
Comment: C: The Variance in HWE
8.0 years ago by GabrielMontenegro ▴ 680
1
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3
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1.4k
views
The Variance in HWE
HWE
updated 8.0 years ago by ▴ 10 • written 8.0 years ago by ▴ 680
0
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0
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4.5k
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Answer: A: Meta-analysis in PLINK - What to use in order to do a forest plot
8.0 years ago by GabrielMontenegro ▴ 680
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