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4.3k
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Comment: C: Is there some databases can predict the function of miRNA
updated 5.1 years ago by 44k • written 9.5 years ago by ▴ 310
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1.2k
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Converting KEGG pathways to SBML with preserving compound and reaction identifiers
KEGG KEGGTRANSLATOR KGML SBML Stoichiometry matrix
6.1 years ago by Na Sed ▴ 310
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1.9k
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Comment: C: Identification of metabolomic biomarkers
6.5 years ago by Na Sed ▴ 310
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1
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1.9k
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Comment: C: Identification of metabolomic biomarkers
6.5 years ago by Na Sed ▴ 310
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1.9k
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Comment: C: Identification of metabolomic biomarkers
6.6 years ago by Na Sed ▴ 310
7
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8
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1.9k
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Identification of metabolomic biomarkers
metabolomics biomarker metabolite
updated 6.6 years ago by 88k • written 6.6 years ago by ▴ 310
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0
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1.2k
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Phylogeny trees with variable indel rate
phylogeny indel rate alignment HMM
7.0 years ago by Na Sed ▴ 310
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0
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2.2k
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Comment: C: Call for Book Chapter- Essentials of Bioinformatics Vol. I-III (Springer)
7.1 years ago by Na Sed ▴ 310
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2
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2.9k
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Pathway analysis for two lists of genes
R gene pathway
updated 23 months ago by 44k • written 9.5 years ago by ▴ 310
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0
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3.6k
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Comment: C: Well-defined subtypes of cancers in TCGA database
7.7 years ago by Na Sed ▴ 310
2
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3
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2.2k
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Need your help to check MsigDB (it takes less than a minute)
MSigDb GSEBase
updated 7.8 years ago by 20 • written 8.1 years ago by ▴ 310
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0
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2.2k
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Comment: C: Need your help to check MsigDB (it takes less than a minute)
8.1 years ago by Na Sed ▴ 310
0
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0
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2.2k
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Comment: C: Need your help to check MsigDB (it takes less than a minute)
8.1 years ago by Na Sed ▴ 310
3
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0
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1.9k
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Comment: C: How to calculate the number of genes has specific repeat on it?
8.1 years ago by Na Sed ▴ 310
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1
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5.3k
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Comment: C: What is the format of *.contigs.fasta files?
8.2 years ago by Na Sed ▴ 310
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1
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5.3k
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Comment: C: What is the format of *.contigs.fasta files?
8.2 years ago by Na Sed ▴ 310
1
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7
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5.3k
views
What is the format of *.contigs.fasta files?
next-gen contig fasta
updated 8.2 years ago by 147k • written 8.2 years ago by ▴ 310
0
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1
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5.3k
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Comment: C: What is the format of *.contigs.fasta files?
8.2 years ago by Na Sed ▴ 310
0
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1
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1.5k
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Comment: C: Meaning of n in an equation of reaction in KEGG
8.2 years ago by Na Sed ▴ 310
4
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3
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1.5k
views
Meaning of n in an equation of reaction in KEGG
KEGG Reaction Equation
updated 8.2 years ago by 104k • written 8.2 years ago by ▴ 310
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0
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1.5k
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Elementary Flux Modes in Reaction Network
reaction metabolic Elementary flux modes EFM
8.3 years ago by Na Sed ▴ 310
0
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0
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2.2k
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Comment: C: Elementary Flux Modes
8.3 years ago by Na Sed ▴ 310
2
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1
reply
3.5k
views
How to download metabolite networks from KEGG database?
metabolite KEGG Reactome
updated 8.4 years ago by 7.6k • written 8.4 years ago by ▴ 310
0
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1
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2.6k
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Comment: C: Scientific Support Analyst - Genomic Data Commons
8.4 years ago by Na Sed ▴ 310
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0
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1.8k
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Comment: C: A quick question: the name of position
8.4 years ago by Na Sed ▴ 310
0
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1
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1.8k
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Comment: C: A quick question: the name of position
8.4 years ago by Na Sed ▴ 310
2
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4
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1.8k
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A quick question: the name of position
reserch assistant research scholar
8.4 years ago by Na Sed ▴ 310
5
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3
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2.6k
views
Metabolic network database
metabolite network biogrid
updated 8.4 years ago by 5.4k • written 8.6 years ago by ▴ 310
3
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1
reply
5.0k
views
Possible normalization and transformation on GWAS data
GWAS Normalization Transformation SNP
8.5 years ago by Na Sed ▴ 310
0
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0
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7.4k
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Comment: C: Annotation in ExpressionSet object
8.5 years ago by Na Sed ▴ 310
4
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1
reply
1.6k
views
A simple question about Affymetrix SNP platform
SNP Affymetrix
updated 8.5 years ago by ▴ 920 • written 8.5 years ago by ▴ 310
0
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1
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7.4k
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Comment: C: Annotation in ExpressionSet object
8.5 years ago by Na Sed ▴ 310
3
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4
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7.4k
views
Annotation in ExpressionSet object
R ExpressionSet
8.5 years ago by Na Sed ▴ 310
0
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3
replies
1.7k
views
Qualified Editing Service
Editing service Native
written 9.2 years ago by ▴ 310
0
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0
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3.3k
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Comment: C: How to use TCGA miRNA seq data?
8.6 years ago by Na Sed ▴ 310
1
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4
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3.6k
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Well-defined subtypes of cancers in TCGA database
TCGA subtype
8.7 years ago by Na Sed ▴ 310
0
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2
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3.5k
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Obtaining length and %GC of genes using Biomart
biomart GC
8.9 years ago by Na Sed ▴ 310
0
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1
reply
2.5k
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Comment: C: Interpret Pathway analysis result
9.0 years ago by Na Sed ▴ 310
0
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0
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1.8k
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Comment: C: mRNA expression levels association
9.0 years ago by Na Sed ▴ 310
0
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0
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1.9k
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Comment: C: Converting tags to gene names in GPL9115
9.0 years ago by Na Sed ▴ 310
2
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2
replies
1.9k
views
Converting tags to gene names in GPL9115
RNA-Seq ChIP-Seq GPL9115 RefSeq-ID
updated 2.3 years ago by 44k • written 9.0 years ago by ▴ 310
0
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0
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2.2k
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Do we need to correct GC-content bias and/or length bias in RNA-Seq level 3 from TCGA?
mRNA length-bias GC-content-bias RNA-Seq miRNA
updated 2.3 years ago by 44k • written 9.1 years ago by ▴ 310
0
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1
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1.3k
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Important genes in ONE category expression profile!!
differential expression gene expression
updated 9.1 years ago by 55k • written 9.1 years ago by ▴ 310
8
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6
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2.6k
views
7 follow
Needed appropriate journal to submit my paper
Thomson-Reuters Journal
updated 2.1 years ago by 44k • written 9.3 years ago by ▴ 310
5
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3
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1.9k
views
Any suggestion for combining different types of scores
GO similarity DO similarity
updated 9.3 years ago by 27k • written 9.3 years ago by ▴ 310
0
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0
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3.5k
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Answer: A: Counting genes based on GO terms
9.3 years ago by Na Sed ▴ 310
0
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0
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7.6k
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Answer: Answer: TCGA/Broad Institute CNV Files Segment Annotation
updated 23 months ago by 44k • written 9.4 years ago by ▴ 310
1
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1
reply
2.4k
views
What is the meaning of conservation site in miRNA-mRNA pairing context?
mRNA conservation miRNA
updated 23 months ago by 44k • written 9.4 years ago by ▴ 310
7
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8
replies
7.3k
views
Log-transformed RNA-Seq data and linear regression
Linear-Regression RNA-Seq R Log-transform
updated 23 months ago by 44k • written 9.4 years ago by ▴ 310
1
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1
reply
3.1k
views
What is the interpretation of the obtained p-value here?
p-value pathway-analysis
updated 23 months ago by 44k • written 9.5 years ago by ▴ 310
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