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Comment: Comment: FeatureCounts alters gene IDs?
2.7 years ago by Shraddha ▴ 90
2
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3
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969
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FeatureCounts alters gene IDs?
hisat2 deseq2 featurecount differential-expression-analysis
updated 2.7 years ago by 148k • written 2.7 years ago by ▴ 90
0
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1
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1.8k
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Comment: Comment: GSEA run with just RNK file
2.8 years ago by Shraddha ▴ 90
0
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1
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1.6k
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Comment: Comment: Compare two scatter plots? Statistical test?
2.8 years ago by Shraddha ▴ 90
0
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1
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743
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Comment: Comment: How to find log2fold change values comparing multiple subgroups
2.8 years ago by Shraddha ▴ 90
3
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3
replies
743
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How to find log2fold change values comparing multiple subgroups
DESeq2 differential-expression
updated 2.8 years ago by 86k • written 2.8 years ago by ▴ 90
0
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0
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2.5k
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Comment: Comment: BLASTn produces empty output + output is 'Killed'
2.9 years ago by Shraddha ▴ 90
0
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0
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2.5k
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Comment: Comment: BLASTn produces empty output + output is 'Killed'
2.9 years ago by Shraddha ▴ 90
0
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1
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2.5k
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Comment: Comment: BLASTn produces empty output + output is 'Killed'
2.9 years ago by Shraddha ▴ 90
1
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8
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2.5k
views
BLASTn produces empty output + output is 'Killed'
blastn blast
2.9 years ago by Shraddha ▴ 90
0
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0
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619
views
Answer: Answer: BLASTn protein identity sequence
2.9 years ago by Shraddha ▴ 90
1
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0
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3.7k
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Comment: Comment: issues with agrigo V2
2.9 years ago by Shraddha ▴ 90
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0
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1.1k
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Answer: Answer: How do I get a gtf file to use rnaQUAST
2.9 years ago by Shraddha ▴ 90
0
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0
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2.9k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.9 years ago by Shraddha ▴ 90
0
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1
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2.9k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.9 years ago by Shraddha ▴ 90
1
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0
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2.9k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.9 years ago by Shraddha ▴ 90
0
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1
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2.9k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
updated 2.9 years ago by 148k • written 2.9 years ago by ▴ 90
0
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1
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2.9k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.9 years ago by Shraddha ▴ 90
0
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0
replies
2.9k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.9 years ago by Shraddha ▴ 90
0
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1
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2.9k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.9 years ago by Shraddha ▴ 90
0
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2
replies
2.9k
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Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.9 years ago by Shraddha ▴ 90
0
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1
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2.9k
views
Comment: Comment: Efetch from eutilities gives '400 Bad Request'; how to fix this?
2.9 years ago by Shraddha ▴ 90
5
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19
replies
2.9k
views
Efetch from eutilities gives '400 Bad Request'; how to fix this?
linux while-loop eutilities
2.9 years ago by Shraddha ▴ 90
2
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0
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17k
views
Answer: Answer: List Of Bioinformatics Books
2.9 years ago by Shraddha ▴ 90
1
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1
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1.2k
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Comment: Comment: How to edit domtblout?
2.9 years ago by Shraddha ▴ 90
2
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1
reply
1.2k
views
Answer: Answer: How to edit domtblout?
2.9 years ago by Shraddha ▴ 90
1
vote
0
replies
760
views
Salmon in alignment mode - what do they mean in the documentation, when they say to use transcriptome.fa?
alignment salmon transcriptome
2.9 years ago by Shraddha ▴ 90
0
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0
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3.3k
views
Comment: Comment: How to extract specific lines from a GTF file?
2.9 years ago by Shraddha ▴ 90
0
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0
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3.3k
views
Comment: Comment: How to extract specific lines from a GTF file?
2.9 years ago by Shraddha ▴ 90
0
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2
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3.3k
views
Comment: Comment: How to extract specific lines from a GTF file?
2.9 years ago by Shraddha ▴ 90
0
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2
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3.3k
views
Comment: Comment: How to extract specific lines from a GTF file?
2.9 years ago by Shraddha ▴ 90
1
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10
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3.3k
views
How to extract specific lines from a GTF file?
command-line grep loop
updated 2.9 years ago by 9.0k • written 2.9 years ago by ▴ 90
0
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0
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775
views
Comment: Comment: Fetching GO terms based on gene IDs using Entrez e-utilities
3.0 years ago by Shraddha ▴ 90
1
vote
2
replies
775
views
Fetching GO terms based on gene IDs using Entrez e-utilities
unix entrez e-utilities
3.0 years ago by Shraddha ▴ 90
0
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0
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994
views
Comment: Comment: Alignment of de novo assembled transcripts to reference transcriptome?
3.1 years ago by Shraddha ▴ 90
0
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2
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994
views
Alignment of de novo assembled transcripts to reference transcriptome?
transcriptomes alignment
3.1 years ago by Shraddha ▴ 90
0
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1
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1.9k
views
Comment: Comment: Why does featurecounts give me an output file with only 0s?
3.1 years ago by Shraddha ▴ 90
0
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1
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1.9k
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Comment: Comment: Why does featurecounts give me an output file with only 0s?
3.1 years ago by Shraddha ▴ 90
0
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1
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1.9k
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Comment: Comment: Why does featurecounts give me an output file with only 0s?
3.1 years ago by Shraddha ▴ 90
0
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1
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1.9k
views
Comment: Comment: Why does featurecounts give me an output file with only 0s?
3.1 years ago by Shraddha ▴ 90
3
votes
9
replies
1.9k
views
Why does featurecounts give me an output file with only 0s?
featurecounts
updated 3.1 years ago by 21k • written 3.1 years ago by ▴ 90
1
vote
1
reply
820
views
Getting samples.txt to use in the salmon to DESeq2 pipeline
salmon deseq2
updated 3.1 years ago by 21k • written 3.1 years ago by ▴ 90
0
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1
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1.2k
views
Comment: Comment: Extracting GeneID from Dbxref section in GFF file while using featureCounts
3.2 years ago by Shraddha ▴ 90
1
vote
3
replies
1.2k
views
Extracting GeneID from Dbxref section in GFF file while using featureCounts
featurecounts gff
updated 3.2 years ago by ★ 3.8k • written 3.2 years ago by ▴ 90
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