Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
485
views
Comment: Comment: advice on rooting a tree in R
6 weeks ago by Matteo Ungaro ▴ 110
2
votes
2
replies
485
views
advice on rooting a tree in R
R tree ggtree phylo
6 weeks ago by Matteo Ungaro ▴ 110
0
votes
0
replies
290
views
Comment: Comment: plot PLINK2.0 output with ggtree
8 weeks ago by Matteo Ungaro ▴ 110
0
votes
1
reply
290
views
plot PLINK2.0 output with ggtree
ibs matrix plink ggtree
8 weeks ago by Matteo Ungaro ▴ 110
0
votes
0
replies
220
views
simulate a genome with specific event
simulation genome retrocopy
9 weeks ago by Matteo Ungaro ▴ 110
0
votes
0
replies
655
views
Comment: Comment: determine softmask regions from FASTA
3 months ago by Matteo Ungaro ▴ 110
0
votes
2
replies
655
views
Comment: Comment: determine softmask regions from FASTA
3 months ago by Matteo Ungaro ▴ 110
2
votes
6
replies
655
views
determine softmask regions from FASTA
BED FASTA softmask
updated 3 months ago by 15k • written 3 months ago by ▴ 110
0
votes
0
replies
1.1k
views
Comment: Comment: how to effectively pipe chromap into samtools view
8 months ago by Matteo Ungaro ▴ 110
0
votes
0
replies
1.1k
views
Comment: Comment: how to effectively pipe chromap into samtools view
8 months ago by Matteo Ungaro ▴ 110
0
votes
2
replies
1.1k
views
Comment: Comment: how to effectively pipe chromap into samtools view
8 months ago by Matteo Ungaro ▴ 110
3
votes
6
replies
1.1k
views
how to effectively pipe chromap into samtools view
samtools bash pipe
8 months ago by Matteo Ungaro ▴ 110
0
votes
0
replies
619
views
Comment: Comment: trailing paired-end slashes (/) in BAM file
9 months ago by Matteo Ungaro ▴ 110
0
votes
0
replies
619
views
Comment: Comment: trailing paired-end slashes (/) in BAM file
9 months ago by Matteo Ungaro ▴ 110
1
vote
4
replies
619
views
trailing paired-end slashes (/) in BAM file
awk BAM sed
updated 9 months ago by 45k • written 9 months ago by ▴ 110
0
votes
1
reply
623
views
Comment: Comment: picard – scatter intervals by n uses
10 months ago by Matteo Ungaro ▴ 110
3
votes
3
replies
623
views
picard – scatter intervals by n uses
bedtools intervals picard bed
updated 10 months ago by 166k • written 10 months ago by ▴ 110
0
votes
1
reply
1.3k
views
Comment: Comment: joint callset and vcf sorting, unknown TAG issue
updated 11 months ago by 166k • written 11 months ago by ▴ 110
0
votes
0
replies
1.3k
views
Comment: Comment: joint callset and vcf sorting, unknown TAG issue
11 months ago by Matteo Ungaro ▴ 110
2
votes
8
replies
1.3k
views
joint callset and vcf sorting, unknown TAG issue
sort bcftools GLNexus merge VCF
updated 11 months ago by 166k • written 11 months ago by ▴ 110
0
votes
1
reply
1.3k
views
Comment: Comment: joint callset and vcf sorting, unknown TAG issue
11 months ago by Matteo Ungaro ▴ 110
0
votes
1
reply
1.3k
views
Comment: Comment: joint callset and vcf sorting, unknown TAG issue
11 months ago by Matteo Ungaro ▴ 110
0
votes
0
replies
628
views
Comment: Comment: bam merging for archaic samples
12 months ago by Matteo Ungaro ▴ 110
0
votes
2
replies
628
views
bam merging for archaic samples
samtools bam
updated 12 months ago by 45k • written 12 months ago by ▴ 110
0
votes
0
replies
708
views
Comment: Comment: filtering VCF sites and impose whatever excluded ad missing
13 months ago by Matteo Ungaro ▴ 110
0
votes
2
replies
708
views
Comment: Comment: filtering VCF sites and impose whatever excluded ad missing
13 months ago by Matteo Ungaro ▴ 110
2
votes
4
replies
708
views
filtering VCF sites and impose whatever excluded ad missing
conditions vcf filters bcftools
13 months ago by Matteo Ungaro ▴ 110
5
votes
4
replies
1.4k
views
change order of violin plots in ggplot2
R ggplot2 violin-plots
updated 13 months ago by 45k • written 13 months ago by ▴ 110
3
votes
0
replies
1.4k
views
Answer: Answer: change order of violin plots in ggplot2
updated 13 months ago by 45k • written 13 months ago by ▴ 110
0
votes
0
replies
1.4k
views
Comment: Comment: change order of violin plots in ggplot2
13 months ago by Matteo Ungaro ▴ 110
0
votes
1
reply
1.4k
views
Comment: Comment: change order of violin plots in ggplot2
13 months ago by Matteo Ungaro ▴ 110
0
votes
1
reply
1.1k
views
Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
14 months ago by Matteo Ungaro ▴ 110
0
votes
5
replies
1.1k
views
PCA from plink2 for SGDP using a pangenome and DeepVariant
umap DeepVariant pangenome plink2 pca
updated 14 months ago by ▴ 480 • written 14 months ago by ▴ 110
0
votes
1
reply
1.1k
views
Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
14 months ago by Matteo Ungaro ▴ 110
1
vote
0
replies
1.7k
views
Comment: Comment: How to create a Venn Diagram for overlapping SVs from a merged VCF
17 months ago by Matteo Ungaro ▴ 110
1
vote
1
reply
1.7k
views
Comment: Comment: How to create a Venn Diagram for overlapping SVs from a merged VCF
17 months ago by Matteo Ungaro ▴ 110
0
votes
1
reply
1.7k
views
Comment: Comment: How to create a Venn Diagram for overlapping SVs from a merged VCF
18 months ago by Matteo Ungaro ▴ 110
8
votes
6
replies
1.7k
views
How to create a Venn Diagram for overlapping SVs from a merged VCF
truvari structural-variants r vcf venn-diagram
17 months ago by Matteo Ungaro ▴ 110
0
votes
0
replies
489
views
Determine INDELs number (both classes separately) from reference and graph-based VCF files
INDEL vcf
updated 19 months ago by 45k • written 19 months ago by ▴ 110
0
votes
0
replies
656
views
Merged CRAM output
warning samtools CRAM merging
22 months ago by Matteo Ungaro ▴ 110
8
votes
4
replies
2.2k
views
Merging CRAM files
samtools CRAM
updated 22 months ago by ★ 1.3k • written 22 months ago by ▴ 110
0
votes
1
reply
2.2k
views
Comment: Comment: Merging CRAM files
22 months ago by Matteo Ungaro ▴ 110
0
votes
0
replies
1.8k
views
Comment: Comment: Edit and re-head BAM file
23 months ago by Matteo Ungaro ▴ 110
0
votes
0
replies
1.8k
views
Comment: Comment: Edit and re-head BAM file
23 months ago by Matteo Ungaro ▴ 110
0
votes
1
reply
1.8k
views
Comment: Comment: Edit and re-head BAM file
23 months ago by Matteo Ungaro ▴ 110
3
votes
6
replies
1.8k
views
Edit and re-head BAM file
samtools BAM
updated 22 months ago by 45k • written 23 months ago by ▴ 110
2
votes
2
replies
956
views
filter VCF based on FORMAT
vcf bcftools
updated 22 months ago by 45k • written 2.1 years ago by ▴ 110
0
votes
1
reply
888
views
Comment: Comment: formatting VCF file for analyses
2.6 years ago by Matteo Ungaro ▴ 110
3
votes
3
replies
888
views
formatting VCF file for analyses
VCF awk
updated 22 months ago by 45k • written 2.6 years ago by ▴ 110
0
votes
0
replies
466
views
Chromosome Path in Pairtools
Pairtools
updated 22 months ago by 45k • written 3.1 years ago by ▴ 110
62 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6