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Answer: Answer: Proposal on CNV (Copies Variants Numer) analysis tools
21 days ago by raphael.B ▴ 540
2
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681
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Bonferroni correction for burden by transcripts
Association-test statistics
updated 5 months ago by ★ 8.1k • written 5 months ago by ▴ 540
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1
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826
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Comment: Comment: Output checks during Snakemake pipeline
9 months ago by raphael.B ▴ 540
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0
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738
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Answer: Answer: How can I Obtain hg38 cancer mutation and variation files
9 months ago by raphael.B ▴ 540
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0
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623
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Answer: Answer: Generating a Python parsable local db from dbSNP
9 months ago by raphael.B ▴ 540
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0
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738
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Comment: Comment: A USER ERROR has occurred: Bad input: Values for QD annotation not detected for
9 months ago by raphael.B ▴ 540
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0
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773
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Comment: Comment: Snakemake rule to copy files
11 months ago by raphael.B ▴ 540
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1
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992
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Comment: Comment: BAM to Bedgraph creating an empty file
12 months ago by raphael.B ▴ 540
2
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3
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1.0k
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Using GPUs in snakemake
Parabricks gpu snakemake slurm
14 months ago by raphael.B ▴ 540
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0
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1.0k
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Answer: Answer: Using GPUs in snakemake
14 months ago by raphael.B ▴ 540
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2
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1.3k
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Comment: Comment: RNA-seq pipeline
17 months ago by raphael.B ▴ 540
2
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1
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3.1k
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Answer: Answer: Individual vs. joint call VCFs
18 months ago by raphael.B ▴ 540
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1
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951
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Comment: Comment: bcftools=1.18 not filtering correcting MAF
18 months ago by raphael.B ▴ 540
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1
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1.3k
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Answer: Answer: Ann.vcf format
21 months ago by raphael.B ▴ 540
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0
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993
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Answer: Answer: functional and genome annotation analysis
21 months ago by raphael.B ▴ 540
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0
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1.0k
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Answer: Answer: BCFtools isec output vs BCFtools query
updated 21 months ago by 45k • written 21 months ago by ▴ 540
2
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0
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757
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Answer: Answer: Association Study
21 months ago by raphael.B ▴ 540
1
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0
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5.0k
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Answer: Answer: RVtests CMC output column definitions
22 months ago by raphael.B ▴ 540
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0
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1.9k
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Answer: Answer: matching gnomAD allele frequency
22 months ago by raphael.B ▴ 540
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1
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3.8k
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Answer: Answer: GATK memory error with Java
22 months ago by raphael.B ▴ 540
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0
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2.6k
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Answer: Answer: Convert files made for b38 into hg19 human reference?
22 months ago by raphael.B ▴ 540
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0
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3.1k
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Comment: Comment: Problem with mamba/conda env create
23 months ago by raphael.B ▴ 540
1
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2
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3.1k
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Comment: Comment: Problem with mamba/conda install
23 months ago by raphael.B ▴ 540
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0
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1.3k
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Comment: Comment: Hwo to identify that BQSR is performed on CRAM file
23 months ago by raphael.B ▴ 540
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1
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1.3k
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Answer: Answer: Hwo to identify that BQSR is performed on CRAM file
23 months ago by raphael.B ▴ 540
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0
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1.1k
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Comment: Comment: rust_htslib unrecognized filter ID
24 months ago by raphael.B ▴ 540
2
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2
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1.1k
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rust_htslib unrecognized filter ID
htslib rust SNP filtering
24 months ago by raphael.B ▴ 540
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0
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1.1k
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Comment: Comment: Processing WES VCF for case control GWAS analysis
2.0 years ago by raphael.B ▴ 540
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2
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1.5k
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Answer: Answer: bcftools "--filter-logic" flag, what + means?
2.0 years ago by raphael.B ▴ 540
1
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2
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1.1k
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Answer: Answer: how to call variants in haploid genome
2.0 years ago by raphael.B ▴ 540
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0
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1.6k
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Comment: Comment: vcftools on 2 snpeff vcf files
2.1 years ago by raphael.B ▴ 540
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1
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1.6k
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Comment: Comment: vcftools on 2 snpeff vcf files
2.1 years ago by raphael.B ▴ 540
2
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1
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1.6k
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Answer: Answer: vcftools on 2 snpeff vcf files
2.1 years ago by raphael.B ▴ 540
1
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1
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1.6k
views
Comment: Comment: Any tutorial how to "link" SNPs with genes?
2.1 years ago by raphael.B ▴ 540
2
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0
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1.7k
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Comment: Comment: error with CombineGVCFs to join large number of files
2.2 years ago by raphael.B ▴ 540
2
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0
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1.3k
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Answer: Answer: multiallelic variants
2.2 years ago by raphael.B ▴ 540
1
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1
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2.7k
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Comment: Comment: GATK GenotypeGVCFs explain
2.2 years ago by raphael.B ▴ 540
2
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0
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851
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Answer: Answer: Snakemake error to build synteny from BUSCO .tsv
2.3 years ago by raphael.B ▴ 540
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0
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1.1k
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Comment: Comment: filter VCF based on FORMAT
2.3 years ago by raphael.B ▴ 540
2
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0
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967
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Answer: Answer: bcftools merge without multiallelic sites
2.3 years ago by raphael.B ▴ 540
3
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0
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743
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Answer: Answer: use fastQC to get one summary report for all the multiple .gz files
2.3 years ago by raphael.B ▴ 540
1
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0
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2.7k
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Answer: Answer: Merge several input files to single output file snakemake
2.3 years ago by raphael.B ▴ 540
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1
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2.4k
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Comment: Comment: GATK4.3 ApplyBQSR
2.3 years ago by raphael.B ▴ 540
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1
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1.7k
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Comment: Comment: AF=NA in gnomad vcf
updated 2.5 years ago by 45k • written 2.5 years ago by ▴ 540
1
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1
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1.7k
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Answer: Answer: AF=NA in gnomad vcf
updated 2.5 years ago by 45k • written 2.5 years ago by ▴ 540
1
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0
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1.4k
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Answer: Answer: STAR Aligment
2.5 years ago by raphael.B ▴ 540
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0
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1.4k
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Comment: Comment: STAR Aligment
2.5 years ago by raphael.B ▴ 540
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0
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3.8k
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Answer: Answer: Count missing and non missing values in a VCF file
2.7 years ago by raphael.B ▴ 540
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0
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1.1k
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Comment: Comment: Representation of variables in PCA
2.7 years ago by raphael.B ▴ 540
1
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1
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1.5k
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Answer: Answer: bcftools merge doesn't recalculate AF
2.7 years ago by raphael.B ▴ 540
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