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Recent Replies
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@genomax has a good point about trying `pbaa`. The tool will output consensus sequences of the different alleles. You can then use MSA to a…
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Another option would be HAILs VDS Combiner, [https://hail.is/docs/0.2/vds/hail.vds.combiner.VariantDatasetCombiner.html#hail.vds.combiner.V…
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thank you for explanation and documentation
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what do you mean by 'low nucleotide diversity'. If it is low nucleotide diversity, is it supposed to have consistent signals, leading to hi…
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The course fills up quickly. If you want to take part, [apply now][1].
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Also you might want to consider this paper and tool: https://onlinelibrary.wiley.com/doi/abs/10.1002/ece3.5015
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Only including this as an alternate option to try (if your reads are HiFi) : https://github.com/PacificBiosciences/pbAA
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