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5.3k
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Comment: Comment: Gene length table from gtf file for rpkm() function
20 months ago by EagleEye 7.5k
3
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1
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1.8k
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Answer: Answer: How to plot UMAP for control vs treatment scRNA seq samples which will depict cl
2.1 years ago by EagleEye 7.5k
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550
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Answer: Answer: Long non coding RNA seq analysis pipeline
2.1 years ago by EagleEye 7.5k
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1.2k
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Answer: Answer: updated GO dataframe in R
2.2 years ago by EagleEye 7.5k
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1.4k
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Answer: Answer: Is there any way to group GO term (biological process) based on close functional
2.2 years ago by EagleEye 7.5k
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1
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1.1k
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Answer: Answer: Suggestions for automated functional analysis of transcripts
2.4 years ago by EagleEye 7.5k
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0
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953
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Answer: Answer: Given set of genomic sequences find potentially enriched genes?
2.6 years ago by EagleEye 7.5k
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911
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Answer: Answer: How to do gene enrichment with locally stored KEGG & Reactome data in R
2.6 years ago by EagleEye 7.5k
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0
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951
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Answer: Answer: Where to store large files?
2.6 years ago by EagleEye 7.5k
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1
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3.0k
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Comment: Comment: Remove contamination across cell clusters
2.6 years ago by EagleEye 7.5k
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3.0k
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Comment: Comment: Enrichr input genes, up, down, or both at once
2.6 years ago by EagleEye 7.5k
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0
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1.8k
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Comment: Comment: Batch effect removal
2.6 years ago by EagleEye 7.5k
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0
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37k
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Comment: Comment: How to embed known cell information into Seurat object? AddMetaData?
2.8 years ago by EagleEye 7.5k
2
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1
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37k
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Comment: Comment: How to embed known cell information into Seurat object? AddMetaData?
2.8 years ago by EagleEye 7.5k
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0
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764
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Comment: Comment: Is geneontology.org down?
2.9 years ago by EagleEye 7.5k
1
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2
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764
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Is geneontology.org down?
database geneontology
2.9 years ago by EagleEye 7.5k
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1
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24k
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Comment: Comment: Gene Set Enrichment Analysis
2.9 years ago by EagleEye 7.5k
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0
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5.2k
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Comment: Comment: Where to get Gene start position to end positon for all gene in an organism
2.9 years ago by EagleEye 7.5k
5
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0
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1.0k
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Answer: Answer: Locating a single cell data set
2.9 years ago by EagleEye 7.5k
2
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0
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1.0k
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Comment: Comment: Locating a single cell data set
2.9 years ago by EagleEye 7.5k
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0
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1.4k
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Comment: Comment: Clarification regarding VCF fields (file format)
2.9 years ago by EagleEye 7.5k
3
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7
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1.4k
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Clarification regarding VCF fields (file format)
mutation VCF SNPs format
updated 2.9 years ago by ▴ 160 • written 2.9 years ago by 7.5k
1
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1
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1.2k
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Answer: Answer: Looking for both RNA-Seq and Single Cell RNA-Seq data collected from the the sam
3.0 years ago by EagleEye 7.5k
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0
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1.3k
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Answer: Answer: Group Genes by Protein Coding/Non-coding feature
3.0 years ago by EagleEye 7.5k
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0
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1.1k
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Comment: Comment: How can I get three letter organism code for cavia porcellus?
3.0 years ago by EagleEye 7.5k
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0
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1.1k
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Answer: Answer: quering publicaly available data sets of RNA-seq and constructing a Kaplan Meie
3.0 years ago by EagleEye 7.5k
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0
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665
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Job: Postdoctoral fellow (computational) in Long non-coding RNA (IncRNA) and cancer biology
computational-biology
updated 2.9 years ago by 43k • written 3.0 years ago by 7.5k
1
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1
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1.9k
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Comment: Comment: FeatureCounts total alignment = 0. an you help me please
3.1 years ago by EagleEye 7.5k
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0
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984
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Answer: Answer: Bioinformatics researcher looking for an answer on edgeR and DESeq2
3.1 years ago by EagleEye 7.5k
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0
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1.2k
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Answer: Answer: problem with SNPs and Indels detectiong useng WGS data
3.1 years ago by EagleEye 7.5k
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0
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3.1k
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Comment: C: How to perform the lncRNA enrichment analysis?
3.2 years ago by EagleEye 7.5k
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0
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1.2k
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Comment: C: RNA-SEQ data, reads count zero
3.2 years ago by EagleEye 7.5k
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1
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2.1k
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Answer: A: Problems specifying data.type and sample.type in TCGAbiolinks GDCquery
3.2 years ago by EagleEye 7.5k
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2
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1.2k
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Answer: A: RNA-SEQ data, reads count zero
3.2 years ago by EagleEye 7.5k
0
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1
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760
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Comment: C: tools for single cell alternative splicing
3.2 years ago by EagleEye 7.5k
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0
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1.3k
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Comment: C: Forward and reverse single cell data analysis
3.2 years ago by EagleEye 7.5k
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2
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1.3k
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Comment: C: Forward and reverse single cell data analysis
3.2 years ago by EagleEye 7.5k
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0
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1.6k
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Answer: A: Where can I find data about gene expression in such deseases as bipolar (maniaca
3.2 years ago by EagleEye 7.5k
0
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0
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816
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Answer: A: lncRNA identification from RNAseq data
3.2 years ago by EagleEye 7.5k
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1
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2.4k
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Comment: C: differential expression- coding genes
3.3 years ago by EagleEye 7.5k
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1
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1.2k
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Comment: C: How to check wether Chip-seq worked or not
3.3 years ago by EagleEye 7.5k
3
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1
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2.4k
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Comment: C: differential expression- coding genes
3.3 years ago by EagleEye 7.5k
3
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1
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2.4k
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Answer: C: differential expression- coding genes
3.3 years ago by EagleEye 7.5k
2
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1
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1.2k
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Answer: A: How to check wether Chip-seq worked or not
3.3 years ago by EagleEye 7.5k
0
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0
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3.0k
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Answer: A: List of TCGA genes differentially expressed in normal versus tumor
3.3 years ago by EagleEye 7.5k
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1
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1.3k
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Comment: C: GO enrichment: enriched term was not assigned to all genes in functional annotat
3.5 years ago by EagleEye 7.5k
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1
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1.3k
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Comment: C: GO enrichment: enriched term was not assigned to all genes in functional annotat
3.5 years ago by EagleEye 7.5k
56
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52
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50k
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12 follow
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
geneSCF Gene-Clustering
updated 11 months ago by 43k • written 9.8 years ago by 7.5k
5
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2
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4.7k
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News: GeneSCF (Gene Enrichment Tool): Advice to users
kegg GeneSCF GO annotation
updated 15 months ago by 43k • written 7.3 years ago by 7.5k
1
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0
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5.9k
views
Answer: A: for go enrichment analysis which tool do you recommend?
3.6 years ago by EagleEye 7.5k
972 results • Page 1 of 20
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