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Comment: Comment: Which RNA type I should considered as long non-coding RNAs
2.6 years ago by Renesh ★ 2.2k
0
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1
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950
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Comment: Comment: Interpretation of coefficient of determination (R^2)
2.6 years ago by Renesh ★ 2.2k
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1
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2.0k
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Comment: Comment: Compare two VCF files in Python
2.7 years ago by Renesh ★ 2.2k
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1
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6.1k
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Comment: Comment: Invert regex match
2.7 years ago by Renesh ★ 2.2k
1
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1
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1.0k
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Comment: Comment: How to extract two genomic location numbers within the following fasta header?
2.7 years ago by Renesh ★ 2.2k
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0
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2.0k
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Comment: Comment: Unable to download fastq files in parallel / SOS
2.7 years ago by Renesh ★ 2.2k
1
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0
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821
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Comment: Comment: Filter criteria for variants based on GBS data
2.7 years ago by Renesh ★ 2.2k
1
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1
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2.0k
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Comment: Comment: Unable to download fastq files in parallel / SOS
2.7 years ago by Renesh ★ 2.2k
1
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0
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1.5k
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Comment: Comment: get read length from sra
2.7 years ago by Renesh ★ 2.2k
0
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0
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967
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Comment: Comment: mutiple fasta to single fasta
2.7 years ago by Renesh ★ 2.2k
1
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0
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5.5k
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Answer: Answer: Why does my t-test fail?
2.7 years ago by Renesh ★ 2.2k
0
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0
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12k
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Comment: Comment: combining quantification (featureCounts) result files into a single dataset
2.8 years ago by Renesh ★ 2.2k
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0
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6.9k
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Comment: Comment: Running featureCounts separately for each sample and merging results
2.8 years ago by Renesh ★ 2.2k
0
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0
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975
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Answer: A: Creating a fasta filter by gene length
3.5 years ago by Renesh ★ 2.2k
0
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1
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2.9k
views
Comment: C: What would be the equivalent fasterq-dump options?
3.5 years ago by Renesh ★ 2.2k
0
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1
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826
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Answer: A: Does alternative splicing analysis not so prevalent in plant study?
3.5 years ago by Renesh ★ 2.2k
0
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0
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5.1k
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Answer: A: Using ComBat-seq on transcript counts
3.5 years ago by Renesh ★ 2.2k
1
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1
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1.3k
views
Comment: C: How to do unsupervised clustering of RNA-Seq data
3.5 years ago by Renesh ★ 2.2k
1
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0
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15k
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Answer: A: Extract sequences from a list of ID
3.6 years ago by Renesh ★ 2.2k
0
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0
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4.4k
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Comment: C: EdgeR analysis with CPM normalzed counts
3.6 years ago by Renesh ★ 2.2k
1
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0
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1.8k
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Comment: C: Plant orthologous genes
3.7 years ago by Renesh ★ 2.2k
0
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1
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1.9k
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Comment: C: Python: regular expression searching error
3.8 years ago by Renesh ★ 2.2k
1
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1
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4.8k
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Answer: A: Heatmap for gene expression
3.8 years ago by Renesh ★ 2.2k
1
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1
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4.4k
views
Answer: A: Confused about the AF tag in VCF from samtools/bcftools mpileup
3.9 years ago by Renesh ★ 2.2k
1
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0
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9.7k
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Answer: A: perplexity value in t-sne algorithm
3.9 years ago by Renesh ★ 2.2k
0
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0
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777
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Comment: C: Assigning proteins to pre-computed gene families
4.4 years ago by Renesh ★ 2.2k
0
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0
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60k
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Answer: A: Tool to generate proportional Venn Diagrams?
4.4 years ago by Renesh ★ 2.2k
0
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0
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1.2k
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Comment: C: Moving sequence in to next line in multi fasta file
4.5 years ago by Renesh ★ 2.2k
0
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0
replies
1.2k
views
Comment: C: How to group genes in a single genome into gene families?
4.5 years ago by Renesh ★ 2.2k
1
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1
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1.2k
views
Answer: A: How to group genes in a single genome into gene families?
4.5 years ago by Renesh ★ 2.2k
0
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0
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2.0k
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Answer: A: Plotting CNV matrix as heatmap using python
4.5 years ago by Renesh ★ 2.2k
0
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0
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2.9k
views
Answer: A: Generating cluster heat map
4.5 years ago by Renesh ★ 2.2k
1
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0
replies
4.5k
views
Comment: C: How to calculate the coverage in targeted sequencing?
4.5 years ago by Renesh ★ 2.2k
0
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0
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115k
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Answer: A: Which Expression Units To Use, Fpkm Or Rpkm ?
4.5 years ago by Renesh ★ 2.2k
1
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0
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169k
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Answer: A: What Is The Sequencing 'Depth' ?
4.5 years ago by Renesh ★ 2.2k
0
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1
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4.5k
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Answer: A: How to calculate the coverage in targeted sequencing?
4.5 years ago by Renesh ★ 2.2k
5
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3
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12k
views
Answer: A: What should be the minimum percent of identity and coverage of blast hits for co
updated 4.5 years ago by 43k • written 8.5 years ago by ★ 2.2k
1
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1
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6.7k
views
Comment: C: Please help me with samtools
updated 4.5 years ago by 43k • written 8.5 years ago by ★ 2.2k
0
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0
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6.7k
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Comment: C: Please help me with samtools
updated 4.5 years ago by 43k • written 8.5 years ago by ★ 2.2k
1
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0
replies
2.3k
views
Answer: A: confirmation RNA-seq's results
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 2.2k
1
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0
replies
3.7k
views
Answer: A: Database for plant ploidy
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 2.2k
1
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1
reply
6.5k
views
Answer: A: How to confirm forward primer matches each read without removing primer sequence
updated 4.5 years ago by 43k • written 8.6 years ago by ★ 2.2k
0
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0
replies
12k
views
Answer: A: Merge vcf files with multiple samples into one vcf with all variants
5.2 years ago by Renesh ★ 2.2k
0
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0
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11k
views
Answer: A: How to merge vcf files with different variants but same samples?
5.2 years ago by Renesh ★ 2.2k
2
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2
replies
2.9k
views
How to use seek() with Biopython SeqIO object
python
updated 2.4 years ago by 43k • written 9.7 years ago by ★ 2.2k
1
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1
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3.5k
views
Answer: A: WGCNA categorical trait with more than 2 levels.
5.4 years ago by Renesh ★ 2.2k
0
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0
replies
17k
views
Answer: A: Benjamini+ Hochberg multiple testing p.adjust R
5.4 years ago by Renesh ★ 2.2k
3
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0
replies
2.4k
views
Answer: A: WGCNA Network Analysis
5.4 years ago by Renesh ★ 2.2k
5
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1
reply
9.9k
views
Answer: A: What is the meaning of "weight" in the WGCNA Cytoscape edge output file?
5.4 years ago by Renesh ★ 2.2k
1
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1
reply
184k
views
Comment: C: How to download raw sequence data from GEO/SRA
5.4 years ago by Renesh ★ 2.2k
216 results • Page 1 of 5
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