Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
1
reply
806
views
Comment: Comment: Correlate number of cells with gene expression of one gene in scRNA Seq
4 months ago by antonioggsousa 3.2k
0
votes
0
replies
814
views
Comment: Comment: how to use multiple command in one line with using the output of last command to
5 months ago by antonioggsousa 3.2k
1
vote
0
replies
504
views
Answer: Answer: Single cell visulaisation webtool
5 months ago by antonioggsousa 3.2k
3
votes
1
reply
854
views
Answer: Answer: Can't do runPCA after merging a splited Seurat object before UMAP
5 months ago by antonioggsousa 3.2k
3
votes
1
reply
912
views
Answer: Answer: Should I scale all genes in single cell Seurat?
5 months ago by antonioggsousa 3.2k
1
vote
0
replies
1.0k
views
Comment: Comment: DESeq2 lfcshrink, shrinkage apeglm vs normal
7 months ago by antonioggsousa 3.2k
0
votes
0
replies
591
views
Answer: Answer: Monocle3 transition to seurat
7 months ago by antonioggsousa 3.2k
0
votes
1
reply
1.0k
views
Comment: Comment: DESeq2 lfcshrink, shrinkage apeglm vs normal
7 months ago by antonioggsousa 3.2k
1
vote
0
replies
420
views
Answer: Answer: Using DADA2 for finding viral sequence variants
7 months ago by antonioggsousa 3.2k
1
vote
1
reply
1.1k
views
Comment: Comment: Cacoa with Seurat analysis
7 months ago by antonioggsousa 3.2k
0
votes
1
reply
807
views
Comment: Comment: Phyloseq and ASV names between datasets
7 months ago by antonioggsousa 3.2k
0
votes
0
replies
1.1k
views
Answer: Answer: Cacoa with Seurat analysis
7 months ago by antonioggsousa 3.2k
0
votes
1
reply
1.1k
views
Comment: Comment: Cacoa with Seurat analysis
7 months ago by antonioggsousa 3.2k
2
votes
1
reply
1.7k
views
Comment: Comment: When should I NOT apply batch correction for my single-cell RNAseq data?
7 months ago by antonioggsousa 3.2k
8
votes
3
replies
1.7k
views
Answer: Answer: When should I NOT apply batch correction for my single-cell RNAseq data?
updated 7 months ago by 43k • written 7 months ago by 3.2k
0
votes
1
reply
1.0k
views
Comment: Comment: 18S taxonomy assignment SILVA database formatting
7 months ago by antonioggsousa 3.2k
1
vote
1
reply
1.0k
views
Answer: Answer: 18S taxonomy assignment SILVA database formatting
7 months ago by antonioggsousa 3.2k
0
votes
1
reply
1.0k
views
Comment: Comment: 18S taxonomy assignment SILVA database formatting
7 months ago by antonioggsousa 3.2k
0
votes
1
reply
1.0k
views
Comment: Comment: 18S taxonomy assignment SILVA database formatting
7 months ago by antonioggsousa 3.2k
1
vote
1
reply
596
views
Comment: Comment: functional analysis applied on 16S rRNA Gene Metabarcoding data
8 months ago by antonioggsousa 3.2k
4
votes
0
replies
1.7k
views
Comment: Comment: Batch effect correction methods (Seurat v3, Harmony, fastMNN, Liger)
14 months ago by antonioggsousa 3.2k
1
vote
0
replies
1.5k
views
Comment: Comment: RDS file in Rstudio
15 months ago by antonioggsousa 3.2k
3
votes
1
reply
1.5k
views
Comment: Comment: RDS file in Rstudio
15 months ago by antonioggsousa 3.2k
0
votes
1
reply
1.5k
views
Comment: Comment: RDS file in Rstudio
15 months ago by antonioggsousa 3.2k
2
votes
1
reply
3.2k
views
Answer: Answer: DoHeatmap Seurat Edit Legend
16 months ago by antonioggsousa 3.2k
0
votes
0
replies
2.2k
views
Comment: Comment: How to get parameter for cluster in scCATCH tool
20 months ago by antonioggsousa 3.2k
1
vote
1
reply
2.2k
views
Comment: Comment: How to get parameter for cluster in scCATCH tool
20 months ago by antonioggsousa 3.2k
1
vote
1
reply
2.2k
views
Comment: Comment: How to get parameter for cluster in scCATCH tool
20 months ago by antonioggsousa 3.2k
0
votes
0
replies
3.2k
views
Comment: Comment: Multiple conditions DESeq2
20 months ago by antonioggsousa 3.2k
1
vote
1
reply
2.2k
views
Comment: Comment: How to get parameter for cluster in scCATCH tool
20 months ago by antonioggsousa 3.2k
2
votes
1
reply
2.2k
views
Answer: Answer: How to get parameter for cluster in scCATCH tool
20 months ago by antonioggsousa 3.2k
0
votes
0
replies
747
views
Comment: Comment: CD4+ and CD8+ T cell classification
21 months ago by antonioggsousa 3.2k
0
votes
1
reply
747
views
Comment: Comment: CD4+ and CD8+ T cell classification
21 months ago by antonioggsousa 3.2k
0
votes
1
reply
1.7k
views
Answer: Answer: Are there any tools that automatically detect where to truncate forward and reve
21 months ago by antonioggsousa 3.2k
0
votes
0
replies
1.2k
views
Comment: Comment: Is it required for all sequences to be same length when clustering OTUs in metag
21 months ago by antonioggsousa 3.2k
1
vote
1
reply
1.2k
views
Answer: Answer: Is it required for all sequences to be same length when clustering OTUs in metag
21 months ago by antonioggsousa 3.2k
0
votes
1
reply
965
views
Comment: Comment: Does Seurat have Poisson normalization method?
21 months ago by antonioggsousa 3.2k
3
votes
1
reply
965
views
Answer: Answer: Does Seurat have Pearson Residual (Poisson) normalization method?
21 months ago by antonioggsousa 3.2k
0
votes
0
replies
8.0k
views
Comment: Comment: Error in Read10X(data.dir
21 months ago by antonioggsousa 3.2k
0
votes
0
replies
643
views
Comment: Comment: gProfiler: Customising the gostplot
23 months ago by antonioggsousa 3.2k
0
votes
1
reply
1.3k
views
Comment: Comment: Compare two bacterial sequence
23 months ago by antonioggsousa 3.2k
0
votes
1
reply
1.3k
views
Comment: Comment: Compare two bacterial sequence
23 months ago by antonioggsousa 3.2k
0
votes
0
replies
24k
views
Comment: Comment: Adding p value to Vlnplot in Seurat
24 months ago by antonioggsousa 3.2k
1
vote
1
reply
24k
views
Comment: Comment: Adding p value to Vlnplot in Seurat
24 months ago by antonioggsousa 3.2k
1
vote
1
reply
863
views
Comment: Comment: Calculate Alpha Diversity out of several Fastq files.
2.2 years ago by antonioggsousa 3.2k
1
vote
1
reply
1.4k
views
Comment: Comment: Which Sample to use for analysis when I have same sample from different lanes?
2.2 years ago by antonioggsousa 3.2k
1
vote
1
reply
1.8k
views
Comment: Comment: Predict Functional potential microbial communities - phyloseq Silva
2.3 years ago by antonioggsousa 3.2k
0
votes
0
replies
1.7k
views
Comment: Comment: Snakemake error in bwahaha pipeline
2.3 years ago by antonioggsousa 3.2k
0
votes
1
reply
1.8k
views
Comment: Comment: Predict Functional potential microbial communities - phyloseq Silva
2.3 years ago by antonioggsousa 3.2k
1
vote
1
reply
1.7k
views
Comment: Comment: Snakemake error in bwahaha pipeline
2.3 years ago by antonioggsousa 3.2k
412 results • Page 1 of 9
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6