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Comment: Comment: Deeptools scale issue for plotHeatmap
8 weeks ago by Devon Ryan 104k
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1
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551
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Comment: Comment: Deeptools scale issue for plotHeatmap
8 weeks ago by Devon Ryan 104k
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votes
1
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551
views
Comment: Comment: Deeptools scale issue for plotHeatmap
8 weeks ago by Devon Ryan 104k
1
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1
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548
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Comment: Comment: Wrong in Deeptools : the enrichment of TSS and TES region are similar when using
6 months ago by Devon Ryan 104k
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627
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Comment: Comment: How to get ncol = nrow?
7 months ago by Devon Ryan 104k
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1
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1.4k
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Comment: Comment: ChIP-seq visualization: Is it valid to do a coverage normalization in addition t
8 months ago by Devon Ryan 104k
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546
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Comment: Comment: DESeq2 : parameter of Negative Binomial model in a context of gene expression
12 months ago by Devon Ryan 104k
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0
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890
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Comment: Comment: How Wald test calculates p-values in DESeq2?
19 months ago by Devon Ryan 104k
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1
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13k
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Comment: Comment: Convert fastq.gz to fastq.bgz
19 months ago by Devon Ryan 104k
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0
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612
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Comment: Comment: Why the number of genes decreased after dds (DESeqDataSetFromMatrix)?
19 months ago by Devon Ryan 104k
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2.0k
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Comment: Comment: Come work with me! Bioinformatician - Boston MA
20 months ago by Devon Ryan 104k
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1
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2.0k
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Comment: Comment: Come work with me! Bioinformatician - Boston MA
20 months ago by Devon Ryan 104k
1
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1
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695
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Comment: Comment: Calculate the ratio of H3K4me3 to H3K4me1 using output of deeptools computeMatri
2.1 years ago by Devon Ryan 104k
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1
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1.9k
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Comment: Comment: Pool or not to pool
2.1 years ago by Devon Ryan 104k
2
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1
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1.9k
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Comment: Comment: Pool or not to pool
2.1 years ago by Devon Ryan 104k
1
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1
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1.9k
views
Comment: Comment: Pool or not to pool
2.1 years ago by Devon Ryan 104k
1
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1
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1.5k
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Comment: Comment: BAM > featurecount > DEseq2 Nextflow/Snakemake pipeline
2.2 years ago by Devon Ryan 104k
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3.5k
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Comment: Comment: Why piping a conda command into bash doesn't work ?
2.2 years ago by Devon Ryan 104k
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2
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3.5k
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Comment: Comment: Why piping a conda command into bash doesn't work ?
2.2 years ago by Devon Ryan 104k
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0
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2.4k
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Comment: Comment: Extracting Methylation Data
2.3 years ago by Devon Ryan 104k
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0
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2.5k
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Comment: Comment: Unexpected Bowtie2 behavior with --phred64 and --phred33 flags
2.3 years ago by Devon Ryan 104k
1
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0
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969
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Comment: Comment: bisulfite methylation alignment rate
2.3 years ago by Devon Ryan 104k
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0
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10k
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Comment: Comment: DESeq2 modelling and Wald's test
2.3 years ago by Devon Ryan 104k
1
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1
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2.5k
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Comment: Comment: Unexpected Bowtie2 behavior with --phred64 and --phred33 flags
2.3 years ago by Devon Ryan 104k
2
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1
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2.8k
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Comment: Comment: normalization for unsupervised analysis by DESeq2
2.3 years ago by Devon Ryan 104k
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1
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969
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Comment: Comment: bisulfite methylation alignment rate
2.3 years ago by Devon Ryan 104k
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0
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4.2k
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Comment: Comment: HIsat2 bam and summary output - multiple output file type
2.3 years ago by Devon Ryan 104k
2
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0
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2.8k
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Comment: Comment: normalization for unsupervised analysis by DESeq2
2.3 years ago by Devon Ryan 104k
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0
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9.0k
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Comment: Comment: featureCounts isoform vs gene summarization
2.3 years ago by Devon Ryan 104k
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0
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1.9k
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Comment: Comment: delete a file
2.4 years ago by Devon Ryan 104k
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0
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1.4k
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Comment: Comment: Log2 Scale Deeptools
2.5 years ago by Devon Ryan 104k
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1
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1.8k
views
Comment: Comment: ? in cram files
2.6 years ago by Devon Ryan 104k
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0
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1.9k
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Comment: Comment: Singularity container for deepTools?
2.6 years ago by Devon Ryan 104k
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0
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1.9k
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Comment: Comment: Kmergenie module readfq not found
2.7 years ago by Devon Ryan 104k
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0
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1.6k
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Comment: Comment: DESeq2 Not full Rank - Age & Medication
2.7 years ago by Devon Ryan 104k
2
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1
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1.6k
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Comment: Comment: DESeq2 Not full Rank - Age & Medication
2.7 years ago by Devon Ryan 104k
1
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0
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1.3k
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Comment: Comment: Bedfile format deeptools
2.7 years ago by Devon Ryan 104k
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1
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902
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Comment: Comment: Methylome Data or DE Analysis
2.8 years ago by Devon Ryan 104k
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0
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1.8k
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Comment: Comment: Inserting Gaps into FASTA files for Alignment to Reference
2.8 years ago by Devon Ryan 104k
1
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0
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4.2k
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Comment: Comment: GC content in bilsulfite converted library
2.8 years ago by Devon Ryan 104k
0
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1
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12k
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Comment: Comment: ViennaRNA error: ImportError: No module named _RNA
2.8 years ago by Devon Ryan 104k
3
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0
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1.3k
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Comment: Comment: Using RefSeq gene annotation file to determine gene lengths
2.9 years ago by Devon Ryan 104k
4
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1
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1.1k
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Comment: Comment: Bioinformatics Definitions
2.9 years ago by Devon Ryan 104k
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0
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4.6k
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Comment: Comment: Installing samtools version 1.12
2.9 years ago by Devon Ryan 104k
2
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1
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1.7k
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Comment: Comment: How much weights a million reads
3.0 years ago by Devon Ryan 104k
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0
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3.7k
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Comment: Comment: When is recommended to remove or keep Unpaired "Orphan" reads in downstream anal
3.0 years ago by Devon Ryan 104k
0
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1
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1.3k
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Comment: Comment: Multi-factor Analysis in DeSEQ2
3.0 years ago by Devon Ryan 104k
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0
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2.7k
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Comment: Comment: deeptools 3.5 Segmentation fault:11
3.0 years ago by Devon Ryan 104k
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1
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2.7k
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Comment: Comment: deeptools 3.5 Segmentation fault:11
3.0 years ago by Devon Ryan 104k
0
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1
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2.7k
views
Comment: Comment: deeptools 3.5 Segmentation fault:11
3.0 years ago by Devon Ryan 104k
7,141 results • Page 1 of 143
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