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Comment: Comment: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
12 hours ago by ATpoint 82k
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103
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Answer: Answer: Getting differential ChIP-seq peaks between conditions after calling consensus p
14 hours ago by ATpoint 82k
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234
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Comment: Comment: RNAseq RNA content
1 day ago by ATpoint 82k
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366
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Comment: Comment: Overlapping Ranges within Granges object
1 day ago by ATpoint 82k
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134
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Comment: Comment: sci-RNA-seq
1 day ago by ATpoint 82k
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366
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Answer: Answer: Overlapping Ranges within Granges object
1 day ago by ATpoint 82k
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363
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Comment: Comment: BWA alignment
1 day ago by ATpoint 82k
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180
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Answer: Answer: Inquiry about deseq2 transformation
1 day ago by ATpoint 82k
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164
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Answer: Answer: The total expressed genes in RNA-Seq data
1 day ago by ATpoint 82k
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126
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Answer: Answer: What is the bin size for Bamcompare?
1 day ago by ATpoint 82k
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363
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Comment: Comment: BWA alignment
2 days ago by ATpoint 82k
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181
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Comment: Comment: Publish a Letter in higher impact vs Research article in lower impact
2 days ago by ATpoint 82k
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351
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Comment: Comment: How to remove multiple batch effects from RNA-seq data before limma differential
3 days ago by ATpoint 82k
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555
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Comment: Comment: Tissue-specific DEG analysis with DEseq2
3 days ago by ATpoint 82k
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265
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Answer: Answer: error in fun(x((i)), ...) : only defined on a data frame with all numeric alike
4 days ago by ATpoint 82k
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204
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Answer: Answer: DESeq2 error
5 days ago by ATpoint 82k
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213
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Comment: Comment: When should I use R-MarkDown over R-Script ?
5 days ago by ATpoint 82k
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224
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Comment: Comment: LncRNA Nomenclature
5 days ago by ATpoint 82k
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326
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Answer: Answer: How to convert normalized BigWig file to count matrix?
6 days ago by ATpoint 82k
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398
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Comment: Comment: Importing a fastq file
6 days ago by ATpoint 82k
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464
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Comment: Comment: RNA seq analysis
7 days ago by ATpoint 82k
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203
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Answer: Answer: How do I change the title font size in ViolinPlot (Seurat)
7 days ago by ATpoint 82k
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212
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Comment: Comment: Exploring Diet Effects in Single-Cell RNA Sequencing
7 days ago by ATpoint 82k
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317
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Comment: Comment: A question about reference genome for creating the consensus sequence
7 days ago by ATpoint 82k
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1
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317
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Answer: Answer: A question about reference genome for creating the consensus sequence
7 days ago by ATpoint 82k
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187
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Comment: Comment: Repeated testing/data mining in RNA Seq
8 days ago by ATpoint 82k
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225
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Comment: Comment: Differentail gene expression results
8 days ago by ATpoint 82k
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172
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Comment: Comment: student
8 days ago by ATpoint 82k
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184
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Answer: Answer: What is the proper way to identify the cell types of scRNAseq cluster?
8 days ago by ATpoint 82k
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244
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Comment: Comment: error in R code
9 days ago by ATpoint 82k
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555
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Answer: Answer: Tissue-specific DEG analysis with DEseq2
9 days ago by ATpoint 82k
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345
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Answer: Answer: install.packages("imudata")
9 days ago by ATpoint 82k
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271
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Comment: Comment: creating batch colum for batch correction
11 days ago by ATpoint 82k
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1
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469
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Comment: Comment: Differential Expression Analysis using DESeq2 in R
12 days ago by ATpoint 82k
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327
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Comment: Comment: Generating mpileup file using samtools
12 days ago by ATpoint 82k
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259
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Answer: Answer: Analysis of intronic reads included scRNA-seq data
12 days ago by ATpoint 82k
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361
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Comment: Comment: What analysis suitable to identify similarly expressed genes between two samples
12 days ago by ATpoint 82k
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202
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Answer: Answer: DSEQ2 analysis
12 days ago by ATpoint 82k
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303
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Comment: Comment: Does comparing two different groups to a common third group introduce bias in th
12 days ago by ATpoint 82k
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309
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Comment: Comment: Problem with data downloaded from Short Reads Archive (SRA)
13 days ago by ATpoint 82k
2
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1
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361
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Answer: Answer: What analysis suitable to identify similarly expressed genes between two samples
13 days ago by ATpoint 82k
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309
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Comment: Comment: Problem with data downloaded from Short Reads Archive (SRA)
13 days ago by ATpoint 82k
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276
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Comment: Comment: Odd alignment question/finding
13 days ago by ATpoint 82k
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352
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Comment: Comment: DESeq2 processing problems
14 days ago by ATpoint 82k
2
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1
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215
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Answer: Answer: MA plot of shrunken fold change
15 days ago by ATpoint 82k
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1
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890
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Answer: Answer: High Malat-1 expression in single cell data
16 days ago by ATpoint 82k
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1
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187
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Comment: Comment: Longitudinal analysis of subpopulations: which approach is better?
16 days ago by ATpoint 82k
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372
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Comment: Comment: How to assign cell types after integration in scRNA
17 days ago by ATpoint 82k
5
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1
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343
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Answer: Answer: ChIP-seq datasets: input samples omitted?
17 days ago by ATpoint 82k
1
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1
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372
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Comment: Comment: How to assign cell types after integration in scRNA
17 days ago by ATpoint 82k
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