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1,000 results • Page
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News:
Online course: Genome Annotation
GenomeAssembly
GenomeAnnoration
2 hours ago by
carlopecoraro2
★ 2.5k
795
votes
167
replies
142k
views
109 follow
News:
The Biostar Handbook. A bioinformatics e-book for beginners.
training
handbook
updated 3 months ago by
Biostar
2.7k • written 7.4 years ago by
Istvan Albert
100k
3
votes
0
replies
163
views
News:
Webinar “Learning Single-cell Atlases” with Dr. Fabian Theis, author of Scanpy on May 8
Scanpy
Generative-AI
scRNA
Machine-Learning
updated 2 days ago by
Ram
43k • written 2 days ago by
Claire Watson
▴ 60
0
votes
0
replies
146
views
News:
Master Meta-analysis with R (May 13-16) - Online!
Meta-Analysis
Statistics
R
updated 3 days ago by
Ram
43k • written 3 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
118
views
News:
8th Berlin Summer School in NGS Data Analysis - Apply Now
DNA-seq
variant-calling
RNA-seq
illumina
transcriptomics
updated 3 days ago by
Ram
43k • written 4 days ago by
David Langenberger
11k
0
votes
0
replies
114
views
News:
hands-on introduction to generalized linear models (GLMs) using R
Generalized-Linear-Models
GLM
R
updated 4 days ago by
Ram
43k • written 4 days ago by
carlopecoraro2
★ 2.5k
3
votes
0
replies
123
views
News:
Interested in Spatial Omics?
Bioconductor
Spatial-Omics
Spatial-Transcriptomics
updated 5 days ago by
Ram
43k • written 5 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
86
views
News:
Online course: DNA methylation
Pacbio
Nanopore
DnaMethylation
Evolution
6 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
132
views
News:
upcoming online statistical courses
Statistics
R
Data-Analysis
updated 7 days ago by
Ram
43k • written 8 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
193
views
News:
Online course: Meta-analysis in R
Meta-Analysis
Statistics
R
updated 10 days ago by
Ram
43k • written 10 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
177
views
News:
Course - Agent-Based Modelling Using NetLogo - University of Lodz, Poland
Netlogo
Individual-Based-Models
Agent-Based-Models
updated 10 days ago by
Ram
43k • written 10 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
176
views
News:
Final Call - Bioinformatics Pipeline Development with Nextflow (May 27-29, 2024)
workshop
RNA-seq
nextflow
DNA-seq
updated 12 days ago by
Ram
43k • written 12 days ago by
David Langenberger
11k
0
votes
0
replies
143
views
News:
Deadline Approaching: PETs for Public Health Challenge
privacy
public-health-challenge
updated 13 days ago by
Ram
43k • written 13 days ago by
polarise
▴ 380
0
votes
0
replies
182
views
News:
Online course: Network Analysis in R
NetworkAnalyis
R
14 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
186
views
News:
Online course: Meta-analysis in R
Meta-Analysis
R
updated 17 days ago by
Ram
43k • written 17 days ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
132
views
News:
Online Live Course: Introduction to Machine Learning in R
Rstats
TScourses
Rlang
Rproject
updated 17 days ago by
Ram
43k • written 17 days ago by
Transmitting Science communication
▴ 70
2
votes
0
replies
125
views
News:
Online Course Generalised Additive Mixed Models (GAMM): modelling space-time correlation structures
GAMM
Rlang
Rstats
Rproject
updated 17 days ago by
Ram
43k • written 17 days ago by
Transmitting Science communication
▴ 70
2
votes
0
replies
126
views
News:
Online Course Introduction to Network Analysis and Modelling
Python
Network-Analysis
updated 17 days ago by
Ram
43k • written 17 days ago by
Transmitting Science communication
▴ 70
2
votes
0
replies
116
views
News:
Course Functional Programming with R
Rstats
TScourses
Rproject
KeepLearning
Rlang
18 days ago by
Transmitting Science communication
▴ 70
12
votes
2
replies
451
views
News:
8th Berlin Summer School in NGS Data Analysis (June 10-14, 2024) - already half booked
Workshop
RNA-Seq
DNA-Seq
Illumina
18 days ago by
David Langenberger
11k
2
votes
0
replies
119
views
News:
Online course: Genome Annotation
Genome-Assembly
RNA-seq
Genome-Annotation
updated 19 days ago by
Ram
43k • written 19 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
122
views
News:
Online course: Multivariate Data Analysis with R and vegan
Multivariate-Statistics
vegan
R
updated 20 days ago by
Ram
43k • written 20 days ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
175
views
News:
Landscape Genomics course in Switzerland
LFMM
Landscape-Genomics
Sambada
R
Local-Adaptation
updated 20 days ago by
Ram
43k • written 22 days ago by
carlopecoraro2
★ 2.5k
8
votes
2
replies
781
views
News:
FINAL CALL - Single-Cell RNA-Seq Data Analysis: A Practical Introduction (May 6-8, 2024 in Berlin)
single-cell
sequencing
23 days ago by
David Langenberger
11k
0
votes
0
replies
148
views
News:
Online course: Food Traceability Using Genomic Tools
Nanopore
Genomic-Tools
Illumina
Food-Traceability
updated 25 days ago by
Ram
43k • written 25 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
147
views
News:
Online course: Eukaryotic Metabarcoding
Metabarcoding
Biodiversity
R
eDNA
27 days ago by
carlopecoraro2
★ 2.5k
3
votes
2
replies
591
views
News:
Announcement: Research Topic "Mechanistic, Machine Learning and Hybrid Models of the 'Other' Endocrine Regulatory Systems in Health and Disease", Vol…
mathematical-modelling
endocrinology
ML
systems-biology
machine-learning
4 weeks ago by
Johannes W. Dietrich
• 0
0
votes
0
replies
210
views
News:
Online course: Reproducibility in Bioinformatics
Singularity
Version-Control
Docker
Containers
updated 4 weeks ago by
Ram
43k • written 4 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
174
views
News:
Online course: Analysis of Prokaryotic Pangenomes (Last call)
Prokaryotic
Bacterial-Genomics
Pangenomics
updated 4 weeks ago by
Ram
43k • written 4 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
167
views
News:
Online course: Introduction to GWAS
GWAS
Imputation
StatisticalPower
5 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
167
views
News:
Online course: Adaptation Genomics
StructuralVariants
Selection
AdaptationGenomics
PopulationStructure
5 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
157
views
News:
Online course: Analysis of Prokaryotic Pangenomes
BacterialGenomics
Pangenomics
5 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
235
views
News:
Online course on Genome Assembly and Annotation (1 seat left)
Galaxy
GenomeAssembly
GenomeAnnotation
6 weeks ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
170
views
News:
NCBI's ClinVar now accepting somatic variation data
variation
NCBI
somatic-variants
ClinVar
6 weeks ago by
PeterC_NCBI
▴ 410
1
vote
1
reply
274
views
News:
EMBL Course Hands-on course for sample preparation and data analysis in proteomics
EMBLProteomics
updated 6 weeks ago by
dr.eldeib89
• 0 • written 11 weeks ago by
EMBL Events
▴ 10
1
vote
0
replies
199
views
News:
Learn how to create robust bioinformatics pipelines for reproducible and comparable NGS analyses
nextflow
pipeline
workshop
6 weeks ago by
David Langenberger
11k
0
votes
0
replies
157
views
News:
Online course: Genome Assembly and Annotation - 3 seats left
Genome-Assembly
Galaxy
Genome-Annotation
updated 6 weeks ago by
Ram
43k • written 6 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
154
views
News:
Call for abstract: Quest for Orthologs meeting in Montreal
conference
phylogeny
comparativegenomics
orthology
evolution
7 weeks ago by
sina.majidian
▴ 20
1
vote
0
replies
158
views
News:
shournal: A Tool for Bioinformaticians to Boost Research Reproducibility
reproducability
terminal
bash
7 weeks ago by
David Langenberger
11k
1
vote
1
reply
199
views
News:
Integrated Genome Browser (IGB) Office Hours
Integrated-Genome-Browser
IGB
updated 7 weeks ago by
Ram
43k • written 7 weeks ago by
IGB Helper
• 0
0
votes
0
replies
188
views
News:
Online course: Network Analysis in Systems Biology with R/Bioconductor
R
RNA-seq
Network-Analysis
Bioconductor
Systems-Biology
updated 7 weeks ago by
Ram
43k • written 8 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
222
views
News:
The 2024 Canadian Bioinformatics Workshops are here!
CBW
workshop
training
8 weeks ago by
bioinformatics.ca
• 0
0
votes
0
replies
178
views
News:
Live online course Data Manipulation with R Tidyverse, 3 and 5 of April
R
manipulation
tidyverse
data
8 weeks ago by
Sole
• 0
0
votes
0
replies
201
views
News:
Online course: Reproducibility in Bioinformatics
Docker
Singularity
WorkflowManagementSystems
Reproducibility
9 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
255
views
News:
Online course: Genome Assembly Using Oxford Nanopore Sequencing - 4 seats remaining
GenomeAssembly
Nanopore
longreads
9 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
236
views
News:
Webinar about scRNA-seq cell type prediction
scRNAseq
updated 9 weeks ago by
GenoMax
141k • written 9 weeks ago by
jenny
• 0
0
votes
0
replies
246
views
News:
Online course: Spatial Omics in R/Bioconductor
R
Spatial-Omics
Bioconductor
tidyverse
transcriptomics
updated 9 weeks ago by
Ram
43k • written 9 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
213
views
News:
Online course: Model-Based Demographic Inference from Population Genomics
Demographic-Inference
Population-Genomics
Demographic-Models
updated 9 weeks ago by
Ram
43k • written 10 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
186
views
News:
Online course: R/Bioconductor for Mass Spectrometry and Proteomics
R
Proteomics
Bioconductor
Mass-Spectrometry
updated 10 weeks ago by
Ram
43k • written 10 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
193
views
News:
Virtual Workshops with the UConn Computational Biology Core
Workshop
genomics
updated 10 weeks ago by
GenoMax
141k • written 10 weeks ago by
mia.nahom
▴ 10
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Answer: NGS forensics: how to know if data is fabricated
Comment: NGS forensics: how to know if data is fabricated
Answer: NGS forensics: how to know if data is fabricated
Comment: NGS forensics: how to know if data is fabricated
Comment: NGS forensics: how to know if data is fabricated
Answer: How to use limma to find differentially expressed genes in response to a continu
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Recent Replies
Answer: NGS forensics: how to know if data is fabricated
by
Mensur Dlakic
★ 27k
I share the opinion by @philippbayer I have seen enough questionable things in life and in science to keep me permanently jaded, but there…
Comment: How many reads for WGS Sequencing?
by
Mensur Dlakic
★ 27k
I downloaded the data in two files from the link you provided. With this command: megahit -1 ERR072246_1.fastq.gz -2 ERR072246_2.fastq…
Comment: How many reads for WGS Sequencing?
by
Mensur Dlakic
★ 27k
If you have Linux the assembly should work on your system, but 8 GB is generally not enough for assembling larger genomes.
Comment: How many reads for WGS Sequencing?
by
Mensur Dlakic
★ 27k
I think you might be getting stuck on less relevant parts of my exercise. The most important point was that nothing is wrong with the data.…
Comment: What does it mean single base resolution in sequencing?
by
dsull
★ 5.9k
Great comprehensive explanation and overview of the technologies -- with regards to sequencing assays, the one thing I'd add is SNV identif…
Answer: What does it mean single base resolution in sequencing?
by
dsull
★ 5.9k
I think that term means slightly different things in different contexts. For example, it's useful to profile mRNA modifications (e.g. m6a) …
Comment: Cannot process all the reads in a fast5 file?
by
chujie
• 0
Hi, I met the same problem, have you found the solution?
Answer: What does it mean single base resolution in sequencing?
by
LauferVA
4.2k
Hi @fe3e6f65 , In a single sentence, the answer to your question can be summarized as, "*the resolution of a genomic technology refers to …
Comment: PCA plot
by
LauferVA
4.2k
Without more context, we cannot interpret this PCA plot. There are many possibilities. In addition, this question is basic enough that it w…
Comment: NGS forensics: how to know if data is fabricated
by
Jeremy Leipzig
22k
i have the name ready: out**liar**
Comment: What does it mean single base resolution in sequencing?
by
GenoMax
141k
Sequencing by hybridization (https://en.wikipedia.org/wiki/Sequencing_by_hybridization ) is likely not giving you single base resolution. B…
Comment: Fetch table from clinvar database according to a list of rsid
by
ashaneev07
▴ 20
Hii... i have updated the script in python..But, still getting no data found. Actually the data is there, i have print the parsed html file…
Comment: How to assign cell types after integration in scRNA
by
ATpoint
82k
https://bioconductor.org/books/release/OSCA.multisample/using-corrected-values.html
Comment: Downloading full alignments from Pfam
by
GenoMax
141k
Not as convenient but the entire set of full alignments can be downloaded here: https://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pf…
Comment: How many reads for WGS Sequencing?
by
GenoMax
141k
> What does clipped Fastq mean? Probably means that NCBI has already scanned and trimmed adapter sequencers. > both forward and revers…
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