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Answer: Answer: Heatmap and rna-seq
22 days ago by Kevin Blighe 88k
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369
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Answer: Answer: Convert to ENTREZGENE
updated 6 weeks ago by 43k • written 6 weeks ago by 88k
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467
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Answer: Answer: Microarray analysis using Limma
4 months ago by Kevin Blighe 88k
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654
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Answer: Answer: ICD9 versus ID10 in UK BRAP
4 months ago by Kevin Blighe 88k
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986
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Answer: Answer: Deseq2 returned the same p-adj for several genes
updated 4 months ago by 43k • written 4 months ago by 88k
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829
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Answer: Answer: Define enhancer regions
4 months ago by Kevin Blighe 88k
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397
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Answer: Answer: Ideas to identify unique genes of each brain regions
4 months ago by Kevin Blighe 88k
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538
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Answer: Answer: filtering low expressed gene in microarray for WGCNA
4 months ago by Kevin Blighe 88k
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450
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Answer: Answer: What is the expression value of GSE29609 in GEO database
4 months ago by Kevin Blighe 88k
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497
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Answer: Answer: Guidance on Crucial Parameters for Bioinformatic Analysis of Metabolomic Data
updated 5 months ago by 142k • written 5 months ago by 88k
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942
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Answer: Answer: Kallisto abundance.tsv
7 months ago by Kevin Blighe 88k
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855
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Answer: Answer: Hugo_Symbol to Entrez ID
7 months ago by Kevin Blighe 88k
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696
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Answer: Answer: How to change from gene_id to GeneID/EntrezID using R
7 months ago by Kevin Blighe 88k
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866
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Answer: Answer: ProbeID to Gene Symbol Mapping in Microarray data analysis using R
9 months ago by Kevin Blighe 88k
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598
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Answer: Answer: ModuleNotFoundError: No module named 'readfq' arises during the execution of k
9 months ago by Kevin Blighe 88k
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2.0k
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Answer: Answer: What to do about "outlier" values in volcano plot?
9 months ago by Kevin Blighe 88k
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586
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Answer: Answer: Metabric samples
9 months ago by Kevin Blighe 88k
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1.6k
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Answer: Answer: To identify Differentially Expressed Genes and Unraveling Upregulated and Downre
9 months ago by Kevin Blighe 88k
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964
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Answer: Answer: Microarray - multiple probe-ids matching to the same gene symbol but different e
9 months ago by Kevin Blighe 88k
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1.3k
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Answer: Answer: How to retrieve Microarray probe annotations
14 months ago by Kevin Blighe 88k
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2.1k
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Answer: Answer: Overlay points with EnhancedVolcano R
14 months ago by Kevin Blighe 88k
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1.0k
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Answer: Answer: Calculation of gene expression 2^-ΔΔCt.
15 months ago by Kevin Blighe 88k
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546
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Answer: Answer: What is read depth exactly?
15 months ago by Kevin Blighe 88k
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1.8k
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Answer: Answer: What are Differentially Expressed Genes ?!!
15 months ago by Kevin Blighe 88k
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582
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Answer: Answer: Calculating Log of the odds (LOD)
15 months ago by Kevin Blighe 88k
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725
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Answer: Answer: installation of bioclite gives an error
updated 12 months ago by 43k • written 15 months ago by 88k
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584
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Answer: Answer: R install BiocManager
16 months ago by Kevin Blighe 88k
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814
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Answer: Answer: Is there a way to obtain a list/dataframe of the CorLevelPlot results?
17 months ago by Kevin Blighe 88k
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1.2k
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Answer: Answer: How can I convert -log10 (p-value) to p-value?
18 months ago by Kevin Blighe 88k
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832
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Answer: Answer: How to deal with "///" in between gene symbols?
18 months ago by Kevin Blighe 88k
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0
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2.3k
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Answer: Answer: Availability of pre-ensembl information in biomart
18 months ago by Kevin Blighe 88k
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3.3k
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Answer: Answer: reduce space between X-axis ticks
19 months ago by Kevin Blighe 88k
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519
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Answer: Answer: RNA-seq dataset of experiment and control group of TARGET-ALL project in TCGA po
19 months ago by Kevin Blighe 88k
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707
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Answer: Answer: Basic PRS question
19 months ago by Kevin Blighe 88k
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969
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Answer: Answer: converting probes robes to gene IDs
20 months ago by Kevin Blighe 88k
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2
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2.0k
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Answer: Answer: microarray analysis in R
20 months ago by Kevin Blighe 88k
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1.0k
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Answer: Answer: Command to insert column with text according to specific text in another column
20 months ago by Kevin Blighe 88k
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2
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902
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Answer: Answer: Find top genes that correlate with my gene of interest using TCGA RNA-Seq data a
20 months ago by Kevin Blighe 88k
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2.7k
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Answer: Answer: Can bioinformatics Phds be completely or almost completely done remotely?
20 months ago by Kevin Blighe 88k
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566
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Answer: Answer: cross platform normalization , can we merge single channel and two channel micro
20 months ago by Kevin Blighe 88k
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1.3k
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Answer: Answer: How to extract all the IDs of VCF file for GWAS analyses?
20 months ago by Kevin Blighe 88k
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0
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848
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Answer: Answer: biomaRt finding transcript lenghts
20 months ago by Kevin Blighe 88k
3
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796
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Answer: Answer: How to extract info of samples of interest from VCF file?
20 months ago by Kevin Blighe 88k
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2
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1.5k
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Answer: Answer: How reliable are WGS results?
20 months ago by Kevin Blighe 88k
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0
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779
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Answer: Answer: Reference that justifies/explains an FPKM cutoff
20 months ago by Kevin Blighe 88k
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0
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626
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Answer: Answer: Whole Genome Sequencing for personal use
21 months ago by Kevin Blighe 88k
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790
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Answer: Answer: microarray format version
21 months ago by Kevin Blighe 88k
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656
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Answer: Answer: other.columns = 'gIsWellAboveBG' is not being added to the object
21 months ago by Kevin Blighe 88k
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1.1k
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Answer: Answer: Reference 1000G data
21 months ago by Kevin Blighe 88k
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961
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Answer: Answer: edgeR analysis w/ factor (Body of Water) and covariate data (Latitude) - Can you
21 months ago by Kevin Blighe 88k
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